ID B8CD94_THAPS Unreviewed; 818 AA.
AC B8CD94;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EED88568.1};
GN ORFNames=THAPSDRAFT_24990 {ECO:0000313|EMBL:EED88568.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED88568.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED88568.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88568.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED88568.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88568.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000650; EED88568.1; -; Genomic_DNA.
DR RefSeq; XP_002294213.1; XM_002294177.1.
DR AlphaFoldDB; B8CD94; -.
DR STRING; 35128.B8CD94; -.
DR PaxDb; 35128-Thaps24990; -.
DR EnsemblProtists; EED88568; EED88568; THAPSDRAFT_24990.
DR GeneID; 7451883; -.
DR KEGG; tps:THAPSDRAFT_24990; -.
DR eggNOG; KOG2671; Eukaryota.
DR HOGENOM; CLU_345652_0_0_1; -.
DR InParanoid; B8CD94; -.
DR Proteomes; UP000001449; Chromosome 15.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR13370; RNA METHYLASE-RELATED; 1.
DR PANTHER; PTHR13370:SF3; TRNA (GUANINE(10)-N2)-METHYLTRANSFERASE HOMOLOG; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT REGION 186..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 48..93
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 189..223
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 818 AA; 92383 MW; 059E4C7A3342F57C CRC64;
MNFNHSNGQR NVYSADGAVG APMHSTDIPK VVVVNHYAEE EESTLHEADH LKARVSELQR
ALQKKDALIT LLIDRTKDLH TKLTNEKQEA KSMASRIVLL LCEIDRLRVD DKANANVRNE
TVISRKLYDR IRCVMDSLED EKNQLDVSLQ NQRRLSTGND TPGRTQNFGY RRQATSDVIS
NQLQYHLTDE AEPTKDTSLV DDSRAKSQRR SSMGDVDHEQ GADGRMTMLR SNRRQSCPDK
IPSVVYSRDP KDEALSRIQN MFTPSLPPES VADENNMNNE LKDSLRTAEL SYSGYYDDST
LEFGLDSVVE DDGRTLGEEL RKYLHVEDDT RAYLSEAKEW HDVKRRAFPR ESAEKNLVEQ
RMSLHHCHKR SKATNAMVVN RSYLSIMSMI LTVVLSAGRL TAFVLRSPSS LQQYSVRQKH
QRIRRWHHFS AQASSDDVSS TTPSPLSQYL IYWRGEHKEG YSQSFRHWEF LSALSATIAN
ANKGVEASDV FKQLERTTFT NAFFFDPFKR KSLEVPSLYQ VGLYNEALQH ISFPTDNNYY
QYITTEVIAN TTERCALIHS SYRVVATGME YSTLVEKASE SGAFDDMISK EIQQVYKSWS
VRRHEYSFAD DDNNPRFGKR TTRSPKKEQA AIIQLKPLLI DFGGKVDLKN PDCHIYLLEG
LRDNECVADA VSGGDELNKI LCIKLASGAK HSIMAPNQRI CVTNTPLCSI SAYLLANIAM
VRDNQTILDP FAGSGATLLA SAIISPSVQT VGVEIATDEV VSRDDIRQDF VSRNLSQPTA
LLAGDAMDAA VRDKARKSTG GEAFDMQWAK IVEKAHHY
//
