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Database: UniProt
Entry: B8LCD0_THAPS
LinkDB: B8LCD0_THAPS
Original site: B8LCD0_THAPS 
ID   B8LCD0_THAPS            Unreviewed;      1273 AA.
AC   B8LCD0;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   07-JUN-2017, entry version 46.
DE   SubName: Full=Predicted protein {ECO:0000313|EMBL:EED86964.1};
GN   ORFNames=THAPSDRAFT_25101 {ECO:0000313|EMBL:EED86964.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae;
OC   Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED86964.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86964.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M.,
RA   Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S.,
RA   Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U.,
RA   Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N.,
RA   Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S.,
RA   Medina M., Montsant A., Obornik M., Parker M.S., Palenik B.,
RA   Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A.,
RA   Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P.,
RA   Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology,
RT   evolution, and metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED86964.1, ECO:0000313|Proteomes:UP000001449}
RP   GENOME REANNOTATION.
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86964.1,
RC   ECO:0000313|Proteomes:UP000001449};
RG   Diatom Consortium;
RA   Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A.,
RA   Detter J.C., Schmutz J., Lindquist E., Shapiro H., Lucas S.,
RA   Glavina del Rio T., Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL   Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; DS999417; EED86964.1; -; Genomic_DNA.
DR   RefSeq; XP_002296763.1; XM_002296727.1.
DR   STRING; 35128.Thaps25101; -.
DR   EnsemblProtists; EED86964; EED86964; THAPSDRAFT_25101.
DR   GeneID; 7445460; -.
DR   KEGG; tps:THAPSDRAFT_25101; -.
DR   eggNOG; ENOG410JA6J; Eukaryota.
DR   eggNOG; COG1226; LUCA.
DR   HOGENOM; HOG000079067; -.
DR   InParanoid; B8LCD0; -.
DR   Proteomes; UP000001449; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR   GO; GO:0008076; C:voltage-gated potassium channel complex; IEA:InterPro.
DR   GO; GO:0005249; F:voltage-gated potassium channel activity; IBA:GO_Central.
DR   GO; GO:0071805; P:potassium ion transmembrane transport; IBA:GO_Central.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR028325; VG_K_chnl.
DR   PANTHER; PTHR11537; PTHR11537; 1.
DR   Pfam; PF00520; Ion_trans; 4.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001449};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     79     98       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    129    152       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    238    260       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    348    372       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    472    491       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    512    531       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    537    553       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    573    594       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    638    661       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    705    726       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    738    757       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    777    797       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    842    864       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    920    945       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1022   1040       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1060   1076       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1088   1108       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1133   1155       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1231   1252       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       76    375       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN      436    652       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN      707    950       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN     1023   1256       Ion_trans. {ECO:0000259|Pfam:PF00520}.
SQ   SEQUENCE   1273 AA;  142171 MW;  0E96BBD9ED779ABC CRC64;
     MEPPTKQPTE NTPLVTSSSL QVTHGSSSLS SPADIASQHD DDVKAVSSTH HSTTTSDRRT
     SLFLFLEAKT PAGLRYESFT IFLIFLSVVT FILSSLFLPE YNDSPLAIKC SSLCDAIWFG
     NYPDNDLSWL GIGATSIVEM FIVGVFTIDY LMRIYTADLL DPNYKGFLGR LRFIPTFFSL
     VDLASTLPFY IDAFVLRDTD LLASNFLRMF RLLRMMKVEG RYDLALGMLD DVFYEQRGIL
     GTALFVGITV WGVMSSFFYI AERNNPDMIY CGAAPDYCFL NEDDVDTRLC IMDEWGVVDC
     SAAGCESQDG KEVCWNLYRS IVDASFWTLM ELFGEFPLVD QHSVFGKVLG TFTAVIAVAV
     FALPAGIFGS GFEDQIAKRR EKKIRLAEVG GAAVDVGDAV EQEVDVDITG GDASNRRGRL
     YNFFHRQNSS LSKASETFIN VLILGTTLSF TFDTITDDYI TTSWHIFFDR FQFFAVVVFT
     AEYVCLVYSA AEDPNYRGSG RLTYVQDFLR MVDLMSIVPY WIVVLQTQQL ILSNDSTIAI
     LAQFCLILRL FRFEKHSKAF TTFDDVLRDN MDVLTVTGFS ALLLWVLFAS ILYITERDNP
     DDEMANNYKT VPNAMWMTLL NLSGECPLAH YTNAGKVCVG IIGLFATAIF GVPIGILGAG
     FEEIVTSENE DVPDQPMNVS TSYAPTVYSF QISCYKFVNG IGSKAAAIFE TSIYLLIGAT
     VLIGVIQTVD GLEDTFGWVE WVAVVVFTFE YVTRFVGAAA DPEFANASSG FMSKINFLFS
     FYSVIDLLAI VPFYLAWAMP GSWVDQHDEY LRMLRLLRLL KLDKYVPSIS LVDDVIRLKR
     RVLVVSCFAA ATLWVLFSGL MYIAEYRDYS ESIDNLPLYG CYENCSMSDR YENMIKAIPL
     TGIHLTGDFP MTEYSGYGRI VLFFMVIAAV GVVSIPSGVI ASGFAEIVQS KSKSRGGEAS
     TGNAGDDWFD IKYRQLEGRS PPLSIFGSKV DVLQRNVKAY LDGSIDEKGV RTRTTLSKAG
     RGFFLGLIIA NILAVILESI PEIDKRVGNQ RGNFFDEFEA WSVFFFTVDY ILRLVSARKS
     REALYSPWVY ATTFFGLVDL ISVAPWIFRV LQLEDFLVAF SKLDNVYRAS KDILKTTGLL
     AVMIWIGASA LFYLFEQNNP NFRQCDTTVP LIGSHKRPGC YDFGSTASCN EYYPGMCSQS
     AFTNMPNTMF FVAVFLGGDW GFVDFTWQGK LVCMFLCIAG IALYSIPVGT LFDAFGAVVG
     LCEDDDDDNE EEE
//
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