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Database: UniProt
Entry: B8LQS8_PICSI
LinkDB: B8LQS8_PICSI
Original site: B8LQS8_PICSI 
ID   B8LQS8_PICSI            Unreviewed;       385 AA.
AC   B8LQS8;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE            EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
OS   Picea sitchensis (Sitka spruce) (Pinus sitchensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Pinopsida; Pinidae; Conifers I; Pinales; Pinaceae; Picea.
OX   NCBI_TaxID=3332 {ECO:0000313|EMBL:ABR18008.1};
RN   [1] {ECO:0000313|EMBL:ABR18008.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Bark {ECO:0000313|EMBL:ABR18008.1};
RA   Ralph S.G., Chun H.E., Liao N., Ali J., Reid K., Kolosova N., Cooper N.,
RA   Cullis C., Jancsik S., Moore R., Mayo M., Wagner S., Holt R.A.,
RA   Jones S.J.M., Marra M.A., Ritland C.E., Ritland K., Bohlmann J.;
RT   "Full length cDNA sequences from Sitka Spruce (Picea sitchensis).";
RL   Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ACN40931.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Bark {ECO:0000313|EMBL:ACN40931.1};
RA   Reid K.E., Liao N., Ralph S., Kolosova N., Oddy C., Moore R., Mayo M.,
RA   Wagner S., King J., Yanchuk A., Holt R., Jones S., Marra M., Ritland C.E.,
RA   Ritland K., Bohlmann J.;
RT   "Full length sequence-verified cDNA sequences from Sitka spruce (Picea
RT   sitchensis).";
RL   Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC         [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC         cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC         EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC   -!- SIMILARITY: Belongs to the RING-type zinc finger family. ATL subfamily.
CC       {ECO:0000256|ARBA:ARBA00024209}.
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DR   EMBL; EF678240; ABR18008.1; -; mRNA.
DR   EMBL; BT071472; ACN40931.1; -; mRNA.
DR   AlphaFoldDB; B8LQS8; -.
DR   OMA; WWEDDST; -.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd16461; RING-H2_EL5-like; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR46539; E3 UBIQUITIN-PROTEIN LIGASE ATL42; 1.
DR   PANTHER; PTHR46539:SF2; RING-H2 FINGER PROTEIN ATL43; 1.
DR   Pfam; PF13639; zf-RING_2; 1.
DR   SMART; SM00184; RING; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   TRANSMEM        69..90
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          153..195
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   REGION          235..277
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          302..355
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        237..266
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        310..349
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   385 AA;  42755 MW;  27CC98F1D586F2DA CRC64;
     MKSRRLAPLN SSNDGGSDLF LTGNSGNLSF SSPFSAMGLS DNRTGVNISS PSNNNHDLFG
     FNGHFNPSLA IIIIVLLSAL FMVGFFSIYF RRRTDEDDSM RRSRRRPRGV IPQGWWEDDS
     TGGLDRDVIE SFPVFSYDLV KGLKAQTKET LECPVCLSQF EDDELLRLLP KCSHAFHPDC
     IDTWLFSHTT CPICRIILVP TDDENPTGTG YGIIEPLEVT PPDEVTVVVD GTRSSWRNGS
     VRRDNDIDTT VASEKADSHE LPGDQATEFS RSHSTGHSLV RLRKEMDQSG TEWYVHTAEG
     LKPGLHRNCS RNALSHSRSQ GPSTSETRPA LSKQTSKNGN ASCSQDTGGS GRRWYERGLR
     SERLTISSMY PSSFLRSFSE HRAPA
//
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