ID B8YMT6_HORVU Unreviewed; 241 AA.
AC B8YMT6;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=Nuclear cap-binding protein subunit 2 {ECO:0000256|RuleBase:RU364036};
DE AltName: Full=20 kDa nuclear cap-binding protein {ECO:0000256|RuleBase:RU364036};
GN Name=cbp20 {ECO:0000313|EMBL:ACL83596.1};
OS Hordeum vulgare (Barley).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
OX NCBI_TaxID=4513 {ECO:0000313|EMBL:ACL83596.1};
RN [1] {ECO:0000313|EMBL:ACL83596.1}
RP NUCLEOTIDE SEQUENCE.
RA Szczesniak M., Jarmolowski A., Szweykowska-Kulinska Z.;
RT "CBP20 in Hordeum vulgare.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU364036}.
CC -!- SIMILARITY: Belongs to the RRM NCBP2 family.
CC {ECO:0000256|ARBA:ARBA00010725, ECO:0000256|RuleBase:RU364036}.
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DR EMBL; FJ548567; ACL83596.1; -; Genomic_DNA.
DR AlphaFoldDB; B8YMT6; -.
DR SMR; B8YMT6; -.
DR ExpressionAtlas; B8YMT6; baseline and differential.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:InterPro.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR CDD; cd12240; RRM_NCBP2; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR027157; NCBP2.
DR InterPro; IPR034148; NCBP2_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR18847; 20 KD NUCLEAR CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR18847:SF0; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 2; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|RuleBase:RU364036};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|RuleBase:RU364036};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU364036};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176,
KW ECO:0000256|RuleBase:RU364036}.
FT DOMAIN 34..112
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 120..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 163..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 124..138
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 172..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 241 AA; 28051 MW; A7093FE7FBC0E2DF CRC64;
MASLFKDPSK LSVYRDRRFP GTQEEFEGAL LASLTVYVGN MSFYTTEEQA YELFSRAGEI
KKIIMGLDKN TKTPCGFCFI LYYSREDAED AVKYISGTML DDRPIRVDFD WGFEEGRQWG
RGRSGGQVRD EYRTDYDPGR GGYGKMVQKE LEAQRELVDY GVGFQTNAPP QFDRADRKRG
YGDRNDRGDY QRRRSAPDMA RRATDSDSKR DANQEPEKNP RFREKGDSDD EDEDYDKKRR
R
//
