ID B9F1Q7_ORYSJ Unreviewed; 742 AA.
AC B9F1Q7;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=OsJ_05030 {ECO:0000313|EMBL:EEE56145.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE56145.1};
RN [1] {ECO:0000313|EMBL:EEE56145.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEE56145.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000139; EEE56145.1; -; Genomic_DNA.
DR AlphaFoldDB; B9F1Q7; -.
DR Proteomes; UP000007752; Chromosome 2.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 7.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 47..81
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 109..144
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 211..241
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 242..276
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 343..377
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 444..478
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 479..514
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 659..709
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 742 AA; 82845 MW; 63A0BDCC76E8E58C CRC64;
MTHAAHALCN RYAAILSSAA GDGGRTGVRV AGAVHCLILK TFLQAPPTFL LNHLLTAYAK
SGRLARARRV FDEMPDPNLF TRNALLSALA HSRLVPDMER LFASMPERDA VSYNALITGF
SSTGSPARSV QLYRALLREE SVRPTRITLS AMIMVASALS DRALGHSVHC QVLRLGFGAY
AFVGSPLVDM YAKMGLIRDA RRVFQEMEAK TVVMYNTLIT GLLRCKMIED AKGLFQLMVD
RDSITWTTMV TGLTQNGLQL EALDVFRRMR AEGVGIDQYT FGSILTACGA LAALEEGKQI
HAYITRTWYE DNVFVGSALV DMYSKCRSIR LAEAVFRRMT CRNIISWTAM IVGYGQNACS
EEAVRAFSEM QMDGIKPDDF TLGSVISSCA NLASLEEGAQ FHCLALVSGL MRYITVSNAL
VTLYGKCGSI EDAHRLFDEM SFHDQVSWTA LVTGYAQFGK AKETIDLFEK MLANGLKPDG
VTFIGVLSAC SRAGLVEKGC DYFDSMQKDH GIVPIDDHYT CMIDLYSRSG RFKEAEEFIK
QMPHSPDAFG WATLLSSCRL RGNMEIGKWA AENLLETDPQ NPASYVLLCS MHAAKGQWTE
VAHLRRGMRD RQVKKEPGCS WIKYKNKVHI FSADDQSHPF SSRIYEKLEW LNSKMAEEGY
KPDVSSVLHD VADADKVHMI SHHSEKLAIA FGLIFVPQEM PIRIVKNLRG NLVYLTLQRR
LSREEFKEVA IHTQRHWLGC KD
//