ID B9F356_ORYSJ Unreviewed; 2095 AA.
AC B9F356;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=TATA-binding protein-associated factor BTAF1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=OsJ_05476 {ECO:0000313|EMBL:EEE56353.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE56353.1};
RN [1] {ECO:0000313|EMBL:EEE56353.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEE56353.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000139; EEE56353.1; -; Genomic_DNA.
DR Proteomes; UP000007752; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR CDD; cd17999; DEXHc_Mot1; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000357; HEAT.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR044972; Mot1.
DR InterPro; IPR044078; Mot1_ATP-bd.
DR InterPro; IPR022707; Mot1_central_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR36498; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR PANTHER; PTHR36498:SF1; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR Pfam; PF12054; DUF3535; 1.
DR Pfam; PF02985; HEAT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 2.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 1316..1351
FT /note="HEAT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00103"
FT DOMAIN 1486..1655
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1866..2027
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 273..310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 406..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2040..2062
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 273..291
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 406..424
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 436..452
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2040..2054
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2095 AA; 232328 MW; 22BC4F5CC63D116E CRC64;
MDISFLFSRV SSLLLDEILY AFEHISFDIP FGLSIYCAKF PLTQLAGSTQ ATRFAAARQI
GEIAKSHPQE LNVLLKKVSP YLRSKNWDTR VAAAHAIGAI AENVKHTSVK DLFASAEAEK
HASGLSGIGD VGSTLRHADT TATSELAFGS FDINRVLEFG SPLLASGGQE YDIANDNGKN
PAERLARQKQ NLRRRLGLDV CEQFMDFNDV IKDEDLLAQK NYWGANMQNN GFYSFNTGQN
IQHLVASMVP RYPKHSNFRS RRLSARELNM LKRKAKSNAK DHTKAVPEDD DVVPKSSGPS
NGASSDQDTV DAITDEDNLE YSENGRWPFQ QFVDQLIHDM FDPIWEVRHG TIMALREILT
HQGACAGVYF PDLNSPFADL DDKNNLDSLK RAHGIDLNED IDSGQLEPVL KRQKKEESNP
EVMDIQLDKE PSNGDYSKTE ASLSTEPTVS SGEPNLAHAK VESPFQVDGS ANPSKVDPYC
TPPHETLNSM PKLSSTHLPE NSKFIKLMKL ANYSAVKNWE FLQDCAIRFL CVLSLDRFGD
YVSDQVVAPV RETCAQALGA VLKYMHPTLV CHTLNILLQM QRRQEWEVRH GSLLGIKYLV
AVRQEMLKDL LNYVLHACKA GLEDPDDDVR AVAAEALIPA AASLVRLNDQ MLHSIVMLLW
DILLDLDDLS PSTSSVMNLL AEIYSQPEMV PKMLGTTAIG GDNEFDLNSV TLVAGEEKMG
SNDNPYVLAA LTPRLWPFMR HSITSVRRSA VRTLERLLEV GNTRNSAKLW LASILGDALQ
VVFQNLLLES NDEIIRSSER AWKLLLQCPT EDLESAASSY FSNWVQLATT PYGTALDSAK
MFLPVALPRG SRSRAAAKIK SARLEHENTR MISFGSTGEN TSQEKHSEAS LSVSKIIVGS
DSDKSVTHTR VLTSMALGLF ASKLPEGSWQ VVLGPLASDL MSLSGVQRQV ASMVIVSWFK
DLRKSDPAAV GTLLAFLSSL KGWMLDLLAC SDPSFPTKDS PLPYAELART YRKMRNEANN
LFQSIESCAL LKEYTSNLNF EADMLSVDDA INFTSKLLLP SEPDFSLDSD KIVLNNIESA
KQGLLSTSGY LKCVQNNLHV TVSSLVASAV VWMAGLPSKL NPVILPLMAA VKREQEEILQ
DKAADALAEL IFSCVGRKPG PNDKLTKNLC TLTCTDASET PQAAVINSIQ VIEDQNLLSI
GKRFSNHKSR GQMTSGGESK SEGFISRRGS ELAFKHLCEK FGASLFEKLP KLWDCLTEFL
KPVKTGDDLM KEDPSIAQLG RSCEDKEPQS LINNIQVVRS VTPHLAEPLR PQLLSLLPCI
LGCVRHPHVA VRLAAARCIT SMAKSLTANV MVIVIENVIP MLSDSSSVCA RQGAGMLLSL
LVQGLAVELV PYAPFLVVPL LRCMSDPDGS VRQTVTHSFA ALVPLLPLAK GSLLPDGLSE
RLSSSAEDAQ FLEQLLDNSQ IDDYKLSIDL SVELRRYQQE GINWLAFLRR FKLHGILCDD
MGLGKTLQAS AIVAADIAES RARNDEQDPK SLIICPSTLV AHWEYEIEKY IDSSIMKPLQ
YIGSSQDRII LRSQFDKFNV IITSYDIIRK DIDFLENVFW NYCVLDEGHI IKNSRSKITS
AVKQLKAQHR LILSGTPIQN NVLELWSLFD FLMPGFLGTE KQFQATYGKP LLAAKDPKCS
AKDAEAGILA MEALHKQVMP FLLRRTKDEV LSDLPEKIIQ DRYCNLSLLQ LKLYDKFSNS
NAKQEISTIV KENELDQSTS QPKATRHVFQ VMPFLLRRTK DEVLSDLPEK IIQDRYCNLS
LLQLKLYDKF SNSNAKQEIS TIVKENELDQ STSQPKATRH VFQALQYLLK LCSHPLLVTG
ESPPDYLVDL LKEIGMGTGD ELHDLHHSPK LVALQEILQE CGIGVTYLRL DGSVEPEKRF
EIVKAFNSDP TIDVLLLTTH VGGLGLNLTS ADTLVFMEHD WNPMKDLQAM DRAHRLGQRK
VVNVHRLIMR GTLEEKVMSL QRFKVSVANA VINAENASLK TMNTDQLLDL FASTPASRKA
SVLPSSSGGD QSKDSKGKSG GKGLKSILNG LDELWDQSQY ADEYDLNQFL AKLNG
//