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Database: UniProt
Entry: B9F356_ORYSJ
LinkDB: B9F356_ORYSJ
Original site: B9F356_ORYSJ 
ID   B9F356_ORYSJ            Unreviewed;      2095 AA.
AC   B9F356;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   RecName: Full=TATA-binding protein-associated factor BTAF1 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=OsJ_05476 {ECO:0000313|EMBL:EEE56353.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE56353.1};
RN   [1] {ECO:0000313|EMBL:EEE56353.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [2] {ECO:0000313|EMBL:EEE56353.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA   Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA   Kristiansen K., Wong G.K.-S.;
RT   "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL   Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; CM000139; EEE56353.1; -; Genomic_DNA.
DR   Proteomes; UP000007752; Chromosome 2.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR   CDD; cd17999; DEXHc_Mot1; 1.
DR   CDD; cd18793; SF2_C_SNF; 1.
DR   Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR000357; HEAT.
DR   InterPro; IPR021133; HEAT_type_2.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR044972; Mot1.
DR   InterPro; IPR044078; Mot1_ATP-bd.
DR   InterPro; IPR022707; Mot1_central_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR36498; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR   PANTHER; PTHR36498:SF1; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR   Pfam; PF12054; DUF3535; 1.
DR   Pfam; PF02985; HEAT; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 2.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS50077; HEAT_REPEAT; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          1316..1351
FT                   /note="HEAT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00103"
FT   DOMAIN          1486..1655
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          1866..2027
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          273..310
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          406..455
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2040..2062
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        273..291
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        406..424
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        436..452
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2040..2054
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   2095 AA;  232328 MW;  22BC4F5CC63D116E CRC64;
     MDISFLFSRV SSLLLDEILY AFEHISFDIP FGLSIYCAKF PLTQLAGSTQ ATRFAAARQI
     GEIAKSHPQE LNVLLKKVSP YLRSKNWDTR VAAAHAIGAI AENVKHTSVK DLFASAEAEK
     HASGLSGIGD VGSTLRHADT TATSELAFGS FDINRVLEFG SPLLASGGQE YDIANDNGKN
     PAERLARQKQ NLRRRLGLDV CEQFMDFNDV IKDEDLLAQK NYWGANMQNN GFYSFNTGQN
     IQHLVASMVP RYPKHSNFRS RRLSARELNM LKRKAKSNAK DHTKAVPEDD DVVPKSSGPS
     NGASSDQDTV DAITDEDNLE YSENGRWPFQ QFVDQLIHDM FDPIWEVRHG TIMALREILT
     HQGACAGVYF PDLNSPFADL DDKNNLDSLK RAHGIDLNED IDSGQLEPVL KRQKKEESNP
     EVMDIQLDKE PSNGDYSKTE ASLSTEPTVS SGEPNLAHAK VESPFQVDGS ANPSKVDPYC
     TPPHETLNSM PKLSSTHLPE NSKFIKLMKL ANYSAVKNWE FLQDCAIRFL CVLSLDRFGD
     YVSDQVVAPV RETCAQALGA VLKYMHPTLV CHTLNILLQM QRRQEWEVRH GSLLGIKYLV
     AVRQEMLKDL LNYVLHACKA GLEDPDDDVR AVAAEALIPA AASLVRLNDQ MLHSIVMLLW
     DILLDLDDLS PSTSSVMNLL AEIYSQPEMV PKMLGTTAIG GDNEFDLNSV TLVAGEEKMG
     SNDNPYVLAA LTPRLWPFMR HSITSVRRSA VRTLERLLEV GNTRNSAKLW LASILGDALQ
     VVFQNLLLES NDEIIRSSER AWKLLLQCPT EDLESAASSY FSNWVQLATT PYGTALDSAK
     MFLPVALPRG SRSRAAAKIK SARLEHENTR MISFGSTGEN TSQEKHSEAS LSVSKIIVGS
     DSDKSVTHTR VLTSMALGLF ASKLPEGSWQ VVLGPLASDL MSLSGVQRQV ASMVIVSWFK
     DLRKSDPAAV GTLLAFLSSL KGWMLDLLAC SDPSFPTKDS PLPYAELART YRKMRNEANN
     LFQSIESCAL LKEYTSNLNF EADMLSVDDA INFTSKLLLP SEPDFSLDSD KIVLNNIESA
     KQGLLSTSGY LKCVQNNLHV TVSSLVASAV VWMAGLPSKL NPVILPLMAA VKREQEEILQ
     DKAADALAEL IFSCVGRKPG PNDKLTKNLC TLTCTDASET PQAAVINSIQ VIEDQNLLSI
     GKRFSNHKSR GQMTSGGESK SEGFISRRGS ELAFKHLCEK FGASLFEKLP KLWDCLTEFL
     KPVKTGDDLM KEDPSIAQLG RSCEDKEPQS LINNIQVVRS VTPHLAEPLR PQLLSLLPCI
     LGCVRHPHVA VRLAAARCIT SMAKSLTANV MVIVIENVIP MLSDSSSVCA RQGAGMLLSL
     LVQGLAVELV PYAPFLVVPL LRCMSDPDGS VRQTVTHSFA ALVPLLPLAK GSLLPDGLSE
     RLSSSAEDAQ FLEQLLDNSQ IDDYKLSIDL SVELRRYQQE GINWLAFLRR FKLHGILCDD
     MGLGKTLQAS AIVAADIAES RARNDEQDPK SLIICPSTLV AHWEYEIEKY IDSSIMKPLQ
     YIGSSQDRII LRSQFDKFNV IITSYDIIRK DIDFLENVFW NYCVLDEGHI IKNSRSKITS
     AVKQLKAQHR LILSGTPIQN NVLELWSLFD FLMPGFLGTE KQFQATYGKP LLAAKDPKCS
     AKDAEAGILA MEALHKQVMP FLLRRTKDEV LSDLPEKIIQ DRYCNLSLLQ LKLYDKFSNS
     NAKQEISTIV KENELDQSTS QPKATRHVFQ VMPFLLRRTK DEVLSDLPEK IIQDRYCNLS
     LLQLKLYDKF SNSNAKQEIS TIVKENELDQ STSQPKATRH VFQALQYLLK LCSHPLLVTG
     ESPPDYLVDL LKEIGMGTGD ELHDLHHSPK LVALQEILQE CGIGVTYLRL DGSVEPEKRF
     EIVKAFNSDP TIDVLLLTTH VGGLGLNLTS ADTLVFMEHD WNPMKDLQAM DRAHRLGQRK
     VVNVHRLIMR GTLEEKVMSL QRFKVSVANA VINAENASLK TMNTDQLLDL FASTPASRKA
     SVLPSSSGGD QSKDSKGKSG GKGLKSILNG LDELWDQSQY ADEYDLNQFL AKLNG
//
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