GenomeNet

Database: UniProt
Entry: B9FLE8_ORYSJ
LinkDB: B9FLE8_ORYSJ
Original site: B9FLE8_ORYSJ 
ID   B9FLE8_ORYSJ            Unreviewed;       385 AA.
AC   B9FLE8;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 56.
DE   RecName: Full=Polygalacturonase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=OsJ_19405 {ECO:0000313|EMBL:EEE64553.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE64553.1};
RN   [1] {ECO:0000313|EMBL:EEE64553.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [2] {ECO:0000313|EMBL:EEE64553.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA   Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA   Kristiansen K., Wong G.K.-S.;
RT   "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL   Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Secreted, cell wall
CC       {ECO:0000256|ARBA:ARBA00004191}.
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family.
CC       {ECO:0000256|ARBA:ARBA00008834, ECO:0000256|RuleBase:RU361169}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM000142; EEE64553.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9FLE8; -.
DR   Proteomes; UP000007752; Chromosome 5.
DR   GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR   InterPro; IPR000743; Glyco_hydro_28.
DR   InterPro; IPR012334; Pectin_lyas_fold.
DR   InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR   PANTHER; PTHR31375; -; 1.
DR   PANTHER; PTHR31375:SF108; OS05G0542800 PROTEIN; 1.
DR   Pfam; PF00295; Glyco_hydro_28; 1.
DR   SUPFAM; SSF51126; Pectin lyase-like; 1.
DR   PROSITE; PS00502; POLYGALACTURONASE; 1.
PE   3: Inferred from homology;
KW   Cell wall {ECO:0000256|ARBA:ARBA00022512};
KW   Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361169};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361169};
KW   Secreted {ECO:0000256|ARBA:ARBA00022512}.
FT   ACT_SITE        215
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU10052"
SQ   SEQUENCE   385 AA;  40725 MW;  EC64BA19A789F452 CRC64;
     MAILRVSVMR LVVAAMAVAA GVLFFSGAGE ARVLLTLDDF GAVGDGITND TQAFLDAWNA
     ACASTDPAVL AVPAGKTYQI WPVRLAGPCK KKLKLMISGT IAAPASPDEW REPCSTVSAP
     KALQFEECRR VSVQGITMQN GPQFHLMFTR CTDVKASFLR VVAPESSPNT DGIHLNDTTH
     AQIMDNLIST GDDCVSMVGN CSDVRVKDIS CGPGHGISIG SLGKNRTTDR IENVRVDTCL
     LTNTTNGVRI KSWQGGMGYA HNLRFEGIVM KNVSNPIIID QYYCDQPTPC ANQTQAVEVR
     KIEFAGIRGT SATEQAIKLA CSDAVPCRDL ELRNVNLTMV GGGAASAFCH RASGKAAGAV
     VPASCLAKAP HRMLGDATPA ARVGS
//
DBGET integrated database retrieval system