ID B9FNU0_ORYSJ Unreviewed; 975 AA.
AC B9FNU0;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=UBA domain-containing protein {ECO:0000259|PROSITE:PS50030};
GN ORFNames=OsJ_18020 {ECO:0000313|EMBL:EEE63210.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE63210.1};
RN [1] {ECO:0000313|EMBL:EEE63210.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEE63210.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000142; EEE63210.1; -; Genomic_DNA.
DR AlphaFoldDB; B9FNU0; -.
DR Proteomes; UP000007752; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47938:SF24; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL-RELATED; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 2.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51375; PPR; 12.
DR PROSITE; PS50030; UBA; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 173..203
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 210..244
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 279..313
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 439..473
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 474..508
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 509..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 579..613
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 614..648
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 649..683
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 684..718
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 719..753
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 878..906
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 975 AA; 108443 MW; 859AB610B051447D CRC64;
MSLRRLARSP SSRSLCAPRS FSFSTSASPP PRAPVPASPS YLAHHLLDEF SRPRATRDAA
RLRRLAAELT APAAESVLLR LPSWRHALDF FRWAADQPGF RHSCYSLNAM ASLLPRHQRA
HLDRLAADAI SARCLMTPGA LGFLLRCLGA AGLPDTAVRA FDAARASFGC TPNSYTYNCL
LDALAKAGRA DDAQARLREM VARCGDGSVD KYTLTSLLRC YCNAGRPDDA NDVFQRMSEL
GWVDEHVLTT LMVAFSKWGK VDGAVELLGS MEALGMRLSE KTLSVLVHGF TKQGRVDKAM
DMFAKMVSYG FVVDLAMYSV LIEGLCQQKD IARAVKLFKE MKSSGVAPDV RLLKKVIEAF
CREGDFAVIG PFINENAEYL KSGSVVPLYN VVLEELVHCG EVEAAYQLLR SMVCGGQAVN
NDVAGGAHML HIREDAKPNS DSFNIVVCGL CKVKKLDMAL ALTKDMISLG CKGKILMFND
LIHELCNMDR LEEGYGIFNQ MKDLGLTPSE FTYNSLFYGI CRRKDPKAAL DLLREMQTNG
HPPWIKNCTE MVQQLCFSGR VTEAVQFLDG MLQIGFLPDI VTYSAAMNGM CNTGEVDDAL
HLFRDISCKY YLPDVVAHNI LINGFRKSSK LDEAQKIMEE MLEKGLFPSV VTYNLMIDVC
CKTGRIEKAI SYLDKMVYEE KQPTVITYTS LIDGFCSAGR PDEAIKLWCE MREKGCAPNN
IAYTAFINGL RKCGRIETAL TYFEEMVTKG FELDTFSLLY FINFLISNGY PMKGCELLKE
VLQKDTYGNN LKMVGLINEA VVELSKDGIT SSDILKFVDK AYTGVNSVVP GNLLQILEGL
EARGNWRWAL SVTEWVYKEN IYEHGKSRYI CDFLQELSEN DEKIKSLVSM GFPEDEAKTA
ITRCGNVYSA NLSDYEDAEF SSFGGRKNTR FMDGSKKKSG MEVGHKGIKC HLVTAMKSQC
LCQILWWIGG IQLAQ
//