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Database: UniProt
Entry: B9FNU0_ORYSJ
LinkDB: B9FNU0_ORYSJ
Original site: B9FNU0_ORYSJ 
ID   B9FNU0_ORYSJ            Unreviewed;       975 AA.
AC   B9FNU0;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   RecName: Full=UBA domain-containing protein {ECO:0000259|PROSITE:PS50030};
GN   ORFNames=OsJ_18020 {ECO:0000313|EMBL:EEE63210.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE63210.1};
RN   [1] {ECO:0000313|EMBL:EEE63210.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [2] {ECO:0000313|EMBL:EEE63210.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA   Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA   Kristiansen K., Wong G.K.-S.;
RT   "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL   Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CM000142; EEE63210.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9FNU0; -.
DR   Proteomes; UP000007752; Chromosome 5.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR015940; UBA.
DR   InterPro; IPR009060; UBA-like_sf.
DR   NCBIfam; TIGR00756; PPR; 13.
DR   PANTHER; PTHR47938:SF24; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL-RELATED; 1.
DR   PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 5.
DR   SUPFAM; SSF48452; TPR-like; 2.
DR   SUPFAM; SSF46934; UBA-like; 1.
DR   PROSITE; PS51375; PPR; 12.
DR   PROSITE; PS50030; UBA; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          173..203
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          210..244
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          279..313
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          314..348
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          439..473
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          474..508
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          509..543
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          579..613
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          614..648
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          649..683
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          684..718
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          719..753
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          878..906
FT                   /note="UBA"
FT                   /evidence="ECO:0000259|PROSITE:PS50030"
FT   REGION          1..36
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..28
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   975 AA;  108443 MW;  859AB610B051447D CRC64;
     MSLRRLARSP SSRSLCAPRS FSFSTSASPP PRAPVPASPS YLAHHLLDEF SRPRATRDAA
     RLRRLAAELT APAAESVLLR LPSWRHALDF FRWAADQPGF RHSCYSLNAM ASLLPRHQRA
     HLDRLAADAI SARCLMTPGA LGFLLRCLGA AGLPDTAVRA FDAARASFGC TPNSYTYNCL
     LDALAKAGRA DDAQARLREM VARCGDGSVD KYTLTSLLRC YCNAGRPDDA NDVFQRMSEL
     GWVDEHVLTT LMVAFSKWGK VDGAVELLGS MEALGMRLSE KTLSVLVHGF TKQGRVDKAM
     DMFAKMVSYG FVVDLAMYSV LIEGLCQQKD IARAVKLFKE MKSSGVAPDV RLLKKVIEAF
     CREGDFAVIG PFINENAEYL KSGSVVPLYN VVLEELVHCG EVEAAYQLLR SMVCGGQAVN
     NDVAGGAHML HIREDAKPNS DSFNIVVCGL CKVKKLDMAL ALTKDMISLG CKGKILMFND
     LIHELCNMDR LEEGYGIFNQ MKDLGLTPSE FTYNSLFYGI CRRKDPKAAL DLLREMQTNG
     HPPWIKNCTE MVQQLCFSGR VTEAVQFLDG MLQIGFLPDI VTYSAAMNGM CNTGEVDDAL
     HLFRDISCKY YLPDVVAHNI LINGFRKSSK LDEAQKIMEE MLEKGLFPSV VTYNLMIDVC
     CKTGRIEKAI SYLDKMVYEE KQPTVITYTS LIDGFCSAGR PDEAIKLWCE MREKGCAPNN
     IAYTAFINGL RKCGRIETAL TYFEEMVTKG FELDTFSLLY FINFLISNGY PMKGCELLKE
     VLQKDTYGNN LKMVGLINEA VVELSKDGIT SSDILKFVDK AYTGVNSVVP GNLLQILEGL
     EARGNWRWAL SVTEWVYKEN IYEHGKSRYI CDFLQELSEN DEKIKSLVSM GFPEDEAKTA
     ITRCGNVYSA NLSDYEDAEF SSFGGRKNTR FMDGSKKKSG MEVGHKGIKC HLVTAMKSQC
     LCQILWWIGG IQLAQ
//
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