ID B9G7V6_ORYSJ Unreviewed; 697 AA.
AC B9G7V6;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN ORFNames=OsJ_30951 {ECO:0000313|EMBL:EEE50691.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE50691.1};
RN [1] {ECO:0000313|EMBL:EEE50691.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEE50691.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000147; EEE50691.1; -; Genomic_DNA.
DR AlphaFoldDB; B9G7V6; -.
DR HOGENOM; CLU_000680_15_4_1; -.
DR Proteomes; UP000007752; Chromosome 10.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR PANTHER; PTHR46890:SF45; RNA BINDING _ RNA-DIRECTED DNA POLYMERASE; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
FT DOMAIN 1..276
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 697 AA; 78821 MW; C024B87D4F55AC91 CRC64;
MPVGWNDTNI VLIPKVKSPS VLKELRPSSL CNVVYKIISK VLANRLKSIL PEIILDTQSA
FVPGRLITDN VLIAYEATHF LQNKRNGKDG YAAIKLDMSK AYDRVEWPFL LHMLRRLGFD
EKWNRLIMNC VTTVNYKIKV NGDYTEVIKP DRGLRQGDPL SPYLFVICAE AFSAAIQAAE
GSKRLCGLRI CRGAPILTHL FFADDSLLLL KATESVANEM KQIILDYERC SGQIVNRDKS
VVMFSSNMDE EEKKVFSHTL GINCIAHNDR YLGLPVFIGR SKAKTFEYLK EKIWRCIQGW
KEKFLSKAGK EILIKAVAQA IPTYAMSCFY LTKSLCDELT SMILRFWWAQ HDNDKKIHWL
GKDKIMKPKS QGGLGFRDLH SFNIAMLARQ GWRLIQNPDS LCSRLLKAKY FPNCNVLDAQ
SRKQMSYSWR SILKGIQLLR KGVIWRVGNG EHINIWSDPW LPRDMRFVTT RRGASLITRV
CELIDPTTGQ WDIELIQQIF NENDAKIITR IPLREGQEDF IAWQPDTKGI FSVKSAYKLH
EKILNELQGQ IGEGGWGVVA RDTDGCPLMM AAGNLQNLHN ANQAEALACI QALKLANDMG
MGHIIVETDA QALKAALLDE TQDRSVNAVI IREAKFLLAM NFNVHQVMYC PRECNRAAHE
LAKIGASLGP RSQFVWLEGF PDVVCNLVAS DSAGLPA
//
