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Database: UniProt
Entry: B9GE56_ORYSJ
LinkDB: B9GE56_ORYSJ
Original site: B9GE56_ORYSJ 
ID   B9GE56_ORYSJ            Unreviewed;       867 AA.
AC   B9GE56;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog {ECO:0000256|HAMAP-Rule:MF_03109};
DE            EC=3.6.5.- {ECO:0000256|HAMAP-Rule:MF_03109};
DE   AltName: Full=Protein SEY1 homolog {ECO:0000256|HAMAP-Rule:MF_03109};
GN   ORFNames=OsJ_36787 {ECO:0000313|EMBL:EEE53563.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE53563.1};
RN   [1] {ECO:0000313|EMBL:EEE53563.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [2] {ECO:0000313|EMBL:EEE53563.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA   Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA   Kristiansen K., Wong G.K.-S.;
RT   "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL   Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Probable GTP-binding protein that may be involved in cell
CC       development. {ECO:0000256|HAMAP-Rule:MF_03109}.
CC   -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC       {ECO:0000256|HAMAP-Rule:MF_03109}; Multi-pass membrane protein
CC       {ECO:0000256|HAMAP-Rule:MF_03109}.
CC   -!- SIMILARITY: Belongs to the TRAFAC class dynamin-like GTPase
CC       superfamily. GB1/RHD3 GTPase family. RHD3 subfamily.
CC       {ECO:0000256|HAMAP-Rule:MF_03109}.
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DR   EMBL; CM000149; EEE53563.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9GE56; -.
DR   Proteomes; UP000007752; Chromosome 12.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR   CDD; cd01851; GBP; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   HAMAP; MF_03109; Sey1; 1.
DR   InterPro; IPR030386; G_GB1_RHD3_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR008803; RHD3/Sey1.
DR   InterPro; IPR046758; Sey1/RHD3-like_3HB.
DR   PANTHER; PTHR45923:SF3; PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1; 1.
DR   PANTHER; PTHR45923; PROTEIN SEY1; 1.
DR   Pfam; PF05879; RHD3_GTPase; 1.
DR   Pfam; PF20428; Sey1_3HB; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS51715; G_GB1_RHD3; 1.
PE   3: Inferred from homology;
KW   Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824, ECO:0000256|HAMAP-
KW   Rule:MF_03109}; GTP-binding {ECO:0000256|HAMAP-Rule:MF_03109};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_03109};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_03109};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|HAMAP-
KW   Rule:MF_03109}; Transmembrane {ECO:0000256|HAMAP-Rule:MF_03109};
KW   Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_03109}.
FT   TOPO_DOM        1..680
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_03109"
FT   TOPO_DOM        702..704
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_03109"
FT   TOPO_DOM        726..867
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_03109"
FT   DOMAIN          37..252
FT                   /note="GB1/RHD3-type G"
FT                   /evidence="ECO:0000259|PROSITE:PS51715"
FT   REGION          758..795
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          808..841
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        758..778
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        813..833
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         47..54
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_03109"
SQ   SEQUENCE   867 AA;  96837 MW;  23582C2FEAF76CD3 CRC64;
     MDEAAAAEAV QLIDGEGEFA ADSAERFMAA AGVAGCGLSY AVVSIMGPQS SGKSTLLNQL
     FGTNFREMDA FRGRSQTTKG IWIARCVGVE PCTVVMDLEG TDGRERGEDD TAFEKQSSLF
     ALAISDIVLI NMWCHDIGRE QAANKPLLKT VFQVMMRLFS PRKTTLLFVI RDKTRTPLEH
     LEPVLREDIQ KIWNSVAKPE AHKDTPISEF FNVQVTALPS FEEKEEQFRE QVQQLRQRFS
     NSIAPGGLAG DRRGVVPASG FLFSSQQIWK VIRENKDLDL PAHKVMVATV RCDEIAHEKF
     SCLTSDAEWM ELESDVQSGP VPGFGKKLGY IVDVHMQEYD KEAIYFDEAV RTAKRQLLKS
     RVLNLVQPAF QKMLAHLRTR ALEKYKTELN LTLESGKGFA AAVRDTTESN LNEFDQGCAD
     AVIEQADWDY SKILEKVRRD VEDHTLSIRE GKLSELTNHA KEKLRKALVE PVESLFDAAG
     PSTWASIRNL FKRETEAILP EFQKNLAGFE MESATSEGMV SKLRDYARSI VENKAKEEAG
     KVLIHMKERF TTVFSHDKDS IPRVWTGKED VRAIAKDARS AALKLLSVLA AIRWDEKPDK
     IEKILTSTLL DGSVTPKSKG ASASSDPLAS TTWEEVSPKY TLITPSQCKS LWKQFKAETE
     FAITQAVSTQ QAHKRGNGRL PPPWAMVAIA VLGFNEIMTL LRNPIYLFLL FVGYLLVKAL
     AVQLDINREF QNGVVPGIIS VTAKLIPTLQ NILNKVATEQ QQQQGHHQDA AAEAPQQQQQ
     PQPQPPPLLL SPRSPMSELR RPLHMPFSPV RKAVSPSPSS SSSTVTSPRN AGEDQKPRQM
     VPHDYKGSKI LQDLQLNLQF YYYNSCC
//
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