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Database: UniProt
Entry: B9GV25_POPTR
LinkDB: B9GV25_POPTR
Original site: B9GV25_POPTR 
ID   B9GV25_POPTR            Unreviewed;       509 AA.
AC   B9GV25;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 78.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=POPTR_002G103600 {ECO:0000313|EMBL:PNT48941.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS   trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT48941.1, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT48941.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA   Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA   Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA   Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA   Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA   Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA   Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA   Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA   Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA   Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA   Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA   Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; CM009291; PNT48941.1; -; Genomic_DNA.
DR   RefSeq; XP_002301082.1; XM_002301046.2.
DR   AlphaFoldDB; B9GV25; -.
DR   EnsemblPlants; Potri.002G103600.1.v4.1; Potri.002G103600.1.v4.1; Potri.002G103600.v4.1.
DR   GeneID; 7461811; -.
DR   Gramene; Potri.002G103600.1.v4.1; Potri.002G103600.1.v4.1; Potri.002G103600.v4.1.
DR   KEGG; pop:7461811; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_0_1; -.
DR   InParanoid; B9GV25; -.
DR   OMA; ASEPCRF; -.
DR   OrthoDB; 2056457at2759; -.
DR   Proteomes; UP000006729; Chromosome 2.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   PROSITE; PS51375; PPR; 7.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          189..223
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          225..259
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          261..295
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          296..330
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          331..365
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          366..400
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          401..435
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   509 AA;  57878 MW;  703E90C2D6394D02 CRC64;
     MNSVKVVICH KHRSFSSLPW ISPLHFLTPK LDPPPKTLLE PRRKPKFISH ETAVNLIKHE
     RDPQHALEIF NLVVEQKGFN HNHATYSTII DKLARAKKFQ AVDALLRQMM YETCKFHESL
     FLNLMKYFAK SSEFERVVEM FNKIQPIVRE KPSLKAISTC LNLLVESKQV DLLRGFLLDL
     NKDHMLKPNT CIFNIFIKYH CKSGDLESAF AVVKEMKKSS ISYPNLITYS TLMDGLCESG
     RLKEAIELFE EMVSKDQILP DALTYNVLIN GFSCWGKVDR AKKIMEFMKS NGCSPNVFNY
     SALMSGFCKE GRLEEAMDAF EEMKIFGLKQ DTVGYTILIN YFCRFGRIDE AMALLEEMKE
     TKCKADIVTV NVLLRGFCGE GRTEEALGML NRLSSEGIYL NKASYRIVLN SLCQKGDLDK
     ALELLGLTLS RGFVPHHATS NELLVGLCKA GMADDAVVAL YGLAEMGFKP EQDSWALLVE
     FVCRERKLLL AFELLDELTA NECEDFVPS
//
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