ID B9H298_POPTR Unreviewed; 255 AA.
AC B9H298;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 24-JAN-2024, entry version 66.
DE RecName: Full=Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein {ECO:0000259|Pfam:PF03168};
GN ORFNames=POPTR_004G067100 {ECO:0000313|EMBL:PNT39929.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT39929.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT39929.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009293; PNT39929.1; -; Genomic_DNA.
DR RefSeq; XP_002305694.2; XM_002305658.2.
DR AlphaFoldDB; B9H298; -.
DR STRING; 3694.B9H298; -.
DR EnsemblPlants; Potri.004G067100.1.v4.1; Potri.004G067100.1.v4.1; Potri.004G067100.v4.1.
DR GeneID; 7494378; -.
DR Gramene; Potri.004G067100.1.v4.1; Potri.004G067100.1.v4.1; Potri.004G067100.v4.1.
DR KEGG; pop:7494378; -.
DR eggNOG; ENOG502QVVS; Eukaryota.
DR HOGENOM; CLU_051752_0_2_1; -.
DR InParanoid; B9H298; -.
DR OMA; CCRIFCW; -.
DR OrthoDB; 465837at2759; -.
DR Proteomes; UP000006729; Chromosome 4.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR004864; LEA_2.
DR PANTHER; PTHR31234; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR PANTHER; PTHR31234:SF55; NDR1/HIN1-LIKE 25; 1.
DR Pfam; PF03168; LEA_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 72..95
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 128..224
FT /note="Late embryogenesis abundant protein LEA-2 subgroup"
FT /evidence="ECO:0000259|Pfam:PF03168"
SQ SEQUENCE 255 AA; 28038 MW; B4CB347B423CD632 CRC64;
MGDNQRIHPA VDVEAPPLAA PLVLRGLVAS GKRSSSLSQQ QPPLSLRTIP AVMQGSKLSQ
TTSCCCCKCI CWTVGLLVLL LGIVGATAGI LYLVFKPKIP NYSVDSLRIS DLRLNFDMTL
YATFDVKITA NNPNKKIGIY YEKGGLLSVW YTDTKLCQGS IPKFYQGHQN ITKLDVSLTG
QTRYGSTLMR TLQEQQQTGR IPLDLKIDAP VSIKLGRLKL RKVRILGNCL LVVNSLSTNN
LISIKASNCK FRLKL
//