ID B9H3D9_POPTR Unreviewed; 464 AA.
AC B9H3D9;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 24-JAN-2024, entry version 81.
DE RecName: Full=THIF-type NAD/FAD binding fold domain-containing protein {ECO:0000259|Pfam:PF00899};
GN ORFNames=POPTR_004G083200 {ECO:0000313|EMBL:PNT40186.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT40186.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT40186.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009293; PNT40186.1; -; Genomic_DNA.
DR RefSeq; XP_002305228.2; XM_002305192.2.
DR AlphaFoldDB; B9H3D9; -.
DR STRING; 3694.B9H3D9; -.
DR EnsemblPlants; Potri.004G083200.1.v4.1; Potri.004G083200.1.v4.1; Potri.004G083200.v4.1.
DR GeneID; 7493577; -.
DR Gramene; Potri.004G083200.1.v4.1; Potri.004G083200.1.v4.1; Potri.004G083200.v4.1.
DR KEGG; pop:7493577; -.
DR eggNOG; KOG2018; Eukaryota.
DR HOGENOM; CLU_013325_9_0_1; -.
DR InParanoid; B9H3D9; -.
DR OMA; SLNRHSC; -.
DR OrthoDB; 10004at2759; -.
DR Proteomes; UP000006729; Chromosome 4.
DR ExpressionAtlas; B9H3D9; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0061503; F:tRNA threonylcarbamoyladenosine dehydratase; IBA:GO_Central.
DR GO; GO:0008641; F:ubiquitin-like modifier activating enzyme activity; IEA:InterPro.
DR GO; GO:0061504; P:cyclic threonylcarbamoyladenosine biosynthetic process; IBA:GO_Central.
DR CDD; cd00755; YgdL_like; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR InterPro; IPR045886; ThiF/MoeB/HesA.
DR InterPro; IPR000594; ThiF_NAD_FAD-bd.
DR InterPro; IPR035985; Ubiquitin-activating_enz.
DR PANTHER; PTHR43267; TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE; 1.
DR PANTHER; PTHR43267:SF2; TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED; 1.
DR Pfam; PF00899; ThiF; 1.
DR SUPFAM; SSF69572; Activating enzymes of the ubiquitin-like proteins; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..29
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 84..333
FT /note="THIF-type NAD/FAD binding fold"
FT /evidence="ECO:0000259|Pfam:PF00899"
SQ SEQUENCE 464 AA; 51264 MW; 8C4EBB37A594258E CRC64;
MEERLKHLTL VGAGALLGSV STLFLLKLLP RSIIKECSKS VGELNAGKGI VSEMSVRSGV
DVDSNSGMPD SDLLADEIVS EQLTRNIQFF GFEAQQKVTT SYVVVIGLGG VGSHAASMLL
RSGVGRLLLV DFDQVSVSSL NRHAVATRAD VGIPKAECLK KHFSTIFPEC HIEAKVLLYD
ASTEEKILSG HPDFVLDCID NIDTKVALLA ACVRRGLKVL SATGAGARAD PTRIRVADLR
ESTNDPLSRA VRYRLRKDHG IEGGIPVVFS LEKPKAKLLP FKGPSGEEEN PSDYQVVPGF
RVRIIPVLGT IPAIFGQVMA SYVVTQLTGL NVHPEPIVNL DLDHYRVLHQ RLIEHEESLF
GTAVQVQVDV EEVMYVAKEL WHGRSARDQF AKDVGRGMWR SVNELMLVRW DKEKPASVSN
LILLKFKEAD EHELRTLEEI KELEPEFYER VESALKRAQL DFGL
//
