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Database: UniProt
Entry: B9HUS7_POPTR
LinkDB: B9HUS7_POPTR
Original site: B9HUS7_POPTR 
ID   B9HUS7_POPTR            Unreviewed;       800 AA.
AC   B9HUS7;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 2.
DT   24-JAN-2024, entry version 85.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=POPTR_010G083700 {ECO:0000313|EMBL:PNT15427.2};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS   trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT15427.2, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT15427.2, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA   Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA   Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA   Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA   Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA   Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA   Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA   Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA   Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA   Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA   Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA   Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   EMBL; CM009299; PNT15427.2; -; Genomic_DNA.
DR   AlphaFoldDB; B9HUS7; -.
DR   STRING; 3694.B9HUS7; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_37_8_1; -.
DR   InParanoid; B9HUS7; -.
DR   Proteomes; UP000006729; Chromosome 10.
DR   GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 6.
DR   Pfam; PF13041; PPR_2; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 6.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          159..193
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          260..294
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          361..391
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          392..426
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          462..492
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          493..527
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          708..800
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   800 AA;  89029 MW;  86DEDA603F7F557D CRC64;
     MTELKQLHSQ ITKNGLNHHP LSLTNLISSC TEMGTFESLE YAQKALELFI EDNGIMGTHY
     MFSSLIRGFS ACGLGYKAIV VFRQLMCMGA VPDNFTFPFV LSACTKSAAL TEGFQVHGAI
     VKMGFERDMF VENSLIHFYG ECGEIDCMRR VFDKMSERNV VSWTSLIGGY AKRGCYKEAV
     SLFFEMVEVG IRPNSVTMVG VISACAKLQD LQLGEQVCTC IGELELEVNA LMVNALVDMY
     MKCGAIDKAR KIFDECVDKN LVLYNTIMSN YVRQGLAREV LAVLGEMLKH GPRPDRITML
     SAVSACSELD DVSCGKWCHG YVLRNGLEGW DNVCNAIINM YMKCGKQEMA CRVFDRMLNK
     TRVSWNSLIA GFVRNGDMES AWKIFSAMPD SDLVSWNTMI GALVQESMFK EAIELFRVMQ
     SEGITADKVT MVGVASACGY LGALDLAKWI HGYIKKKDIH FDMHLGTALV DMFARCGDPQ
     SAMQVFNKMV KRDVSAWTAA IGAMAMEGNG TGAIELFDEM LQQGIKPDGV VFVALLTALS
     HGGLVEQGWH IFRSMKDIYG IAPQAVHYGC MVDLLGRAGL LSEALSLINS MQMEPNDVIW
     GSLLAACRVH KNVDIAAYAA ERISELDPER TGIHVLLSNI YASAGRWDDV AKVRLHLKEK
     GAHKMPGSSS IEINGKIFEF TTGDESHPEM THIEPMLKEI CCRLRDIGYV PDLTNVLLDV
     NEKEKEYLLS RHSEKLAIAF ALISTGQGMP IRVAKNLRIC SDCHSFAKLV SKSYSREIIV
     RDNNRFHFFQ QGFCSCGDYW
//
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