ID B9R9E7_RICCO Unreviewed; 799 AA.
AC B9R9E7;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE SubName: Full=Homeobox protein, putative {ECO:0000313|EMBL:EEF51424.1};
GN ORFNames=RCOM_1496700 {ECO:0000313|EMBL:EEF51424.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
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DR EMBL; EQ973773; EEF51424.1; -; Genomic_DNA.
DR RefSeq; XP_002510822.1; XM_002510776.2.
DR AlphaFoldDB; B9R9E7; -.
DR STRING; 3988.B9R9E7; -.
DR GeneID; 8258278; -.
DR KEGG; rcu:8258278; -.
DR eggNOG; ENOG502QWUC; Eukaryota.
DR InParanoid; B9R9E7; -.
DR OrthoDB; 3036383at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 3.30.530.20; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR023393; START-like_dom_sf.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR PANTHER; PTHR45654:SF111; PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000008311}.
FT DOMAIN 98..158
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 296..532
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 100..159
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 71..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 152..184
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 799 AA; 88097 MW; B2B9AD196796C097 CRC64;
MRFGVLMIRN SVDTGGDIMH SDAIAKPLLT PTVPKSPALS LSIKGKKMDN HGDMGLLGEH
FDPSLVGRLK EDGYESRSGS DNLEGASGDD QEAGEDQRPR KKKYHRHTPL QIQELEVCFK
ECPHPDEKQR LELSRRLGLE SKQIKFWFQN RRTQMKTQLE RHENIILRQE NDKLRAENEL
LSQNMTDPMC NGCGGPVVPG PVSFDQQQLR IENARLKDEL GRVCALANKF LGRPLSSSAN
PIPPFGSNSK LELAVGRNGY GDLGNVESTF QMGLDYNDAI TMPLMKQLTG PMVSEVPYDR
SMMIDLAVAA MDELVKIAQI DNPLWIKSLD GGKDTLNYEE YMRTFSPCIG MKPNSFIPEA
TRDTGIVIIN ILALVEILMD VNRWLEAFPS LIARASTIDV ISSGMAGTKN GALQVMNAEF
QVVSPLVPVR QVRFLRFCKQ HSEGVWVVVD VSIDANLESS NAHPFAACRR LPSGCILQEM
PNGCSKVTWV EHSEYDESAV HQLYRSILSS GKGFGAQRWV ATLQRYCECM TILMSPTISG
EDQTVMSLSG KKSMLKLAQR MVDNFCSGVC ASSLRKWDKL LVGNIGEDVR ILTRKNINDP
GEPPGIVLSA ATSVWLPVMR QRLFDFLRDE RSRCEWDILS HGGMLQEMVH ISKSHSRANC
VSLLRSTAVS PNANDSSMLI LQETWHDVAS SLVVYAPVDI PSMSVVMNGG DSTYVALLPS
GFVILPDDSS SQGGSNFCNG TLVKRDSDGG DGGGCILTVG FQILVNNLPT AKLTVESVET
VNNLISCTIQ RIKAALQIT
//
