ID B9RMS4_RICCO Unreviewed; 819 AA.
AC B9RMS4;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=Protein SDA1 {ECO:0000256|RuleBase:RU365057};
GN ORFNames=RCOM_1083180 {ECO:0000313|EMBL:EEF47597.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000256|RuleBase:RU365057}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|RuleBase:RU365057}.
CC -!- SIMILARITY: Belongs to the SDA1 family.
CC {ECO:0000256|RuleBase:RU365057}.
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DR EMBL; EQ973789; EEF47597.1; -; Genomic_DNA.
DR RefSeq; XP_002515043.1; XM_002514997.2.
DR AlphaFoldDB; B9RMS4; -.
DR STRING; 3988.B9RMS4; -.
DR GeneID; 8285457; -.
DR KEGG; rcu:8285457; -.
DR eggNOG; KOG2229; Eukaryota.
DR InParanoid; B9RMS4; -.
DR OrthoDB; 5482564at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IBA:GO_Central.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR012977; SDA1_N.
DR PANTHER; PTHR12730; HSDA/SDA1-RELATED; 1.
DR PANTHER; PTHR12730:SF0; PROTEIN SDA1 HOMOLOG; 1.
DR Pfam; PF08158; SDA1_HEAT; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU365057};
KW Protein transport {ECO:0000256|RuleBase:RU365057};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Ribosome biogenesis {ECO:0000256|RuleBase:RU365057};
KW Transport {ECO:0000256|RuleBase:RU365057}.
FT DOMAIN 87..463
FT /note="SDA1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08158"
FT REGION 288..322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 519..654
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 754..819
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 288..309
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 534..556
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 557..626
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 627..654
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 777..802
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 803..819
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 819 AA; 92253 MW; E0F6FC1A852F4E9A CRC64;
MSAPTGRSPE PLIASGKSSE KLSLPTLQSK MKIDPEGYET ELSLLYSQFN SALELFQQQS
ALNFTSSSSG ICADPTIAKE LGDRAMFLAH MTPFYPKQLA NFPSELSEFL KSSSKSLPSG
LRSHVSQALI LLINRKMVDI SETLGLFMEL QTLGDRNLKK LAFSHVVHSI RRMNKKHKND
AKNRVLQNIL FEILQQEDEG RAKRSLITLC ELHRRKVWFD DRTANAICMA CFHSSSRIMI
AAMSFLLDFE KIEDDNSDDS DASSEDDSNT HLPRVLLSKE AVYKAHHKGT VSSKKKKKAK
LQRAMRSMKR QHRLSSDKSS SNYYSPLSHL KDAQGFAERL LSRLQTCNER FEVKMMMLKL
IARTVGLHQL ILLNFYPFVQ KYVQPHQRDI TNLLAAAVQA CHDMVPPDAV EPLFKQIVNQ
FVHDRSRPEA IAVGLNVIRE ICLRMPLLMT EDLLQDLVLY KKSHEKAISA AARSLMILFR
EVCPSLLIKK DRGRPIDPKA KPKAFGEVNV ASNIPGVELL QHDDDDDDHS DNDHDESNGD
MDNLESSGHH DDYDDETAAP SDDEENEISN DDSGSEDGDL EDDSVDEDDH NSVDENESDD
GNNSIDENDS DDCANSIDES DSDLSDGDAE EHEKVTKGMK EVNESKASKR KFSDFDGKLI
DADTSLRALK RLAEEKSNHT SSDLADGILS NEDFKRIKEL KAKKEAKVAL TRQGIKVPSS
DQLSVKRVDP SKLEAHVRHK LSKEERLALV KAGREETGKY QARTAIKKKK TGGKSNRQKQ
HEKLMPSAAR KARAERSRQE KKRKQTRSGK QFRGKKAWK
//
