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Database: UniProt
Entry: B9SB57_RICCO
LinkDB: B9SB57_RICCO
Original site: B9SB57_RICCO 
ID   B9SB57_RICCO            Unreviewed;       488 AA.
AC   B9SB57;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 54.
DE   SubName: Full=Pentatricopeptide repeat-containing protein, putative {ECO:0000313|EMBL:EEF39147.1};
GN   ORFNames=RCOM_0785070 {ECO:0000313|EMBL:EEF39147.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
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DR   EMBL; EQ973911; EEF39147.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9SB57; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   InParanoid; B9SB57; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF13041; PPR_2; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        162..185
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        277..294
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        306..329
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REPEAT          100..134
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          202..236
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          305..339
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          340..374
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   488 AA;  54682 MW;  5C7F334C468D736D CRC64;
     MQVPLLILAP RGTRKPRLFN KLFTTWTAPP PRATCLISHY FSLLHSSPDL THLRHLHARL
     LRTSLYDNVV LSSKLVLMYS HHNRLTPHSL STFFHMPCKN IYSWNIIIGE FARSNLPEKS
     VDLFIDMRRD SHFQPDDFSL PLVLRACAGS GLGKLGSSVH GLCVKMGLAV SLFVGSALVF
     MYVTFGNVSN ARVVFDEMAK RDSVLWTALL SGYAQNGEPK LGLQVFREMV DNSTRVKLDW
     VVMVSLLLVC GQLGSLKHGK SVHGWCVRNC LRLELSLGNA IVHMYIKCGM LAYAHRFFDK
     MPERDVFSWS SLILGYGLSG NVSVALCLFD QMHMRGIKPN DVTFLGILSA CGHGGLVEQA
     RSYFKMMQNY GLVAELRHYA TIVDCLARAG RFEEAEKFIS DIPMEPDEAV LGAILAGCRV
     HNNVEVGERI AKRLIRLKPE KAGYYVLLAN MYAGVGRFHE AEMVRDSMQE KNMSKVPGCS
     LLESKSCF
//
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