ID B9SB57_RICCO Unreviewed; 488 AA.
AC B9SB57;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE SubName: Full=Pentatricopeptide repeat-containing protein, putative {ECO:0000313|EMBL:EEF39147.1};
GN ORFNames=RCOM_0785070 {ECO:0000313|EMBL:EEF39147.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ973911; EEF39147.1; -; Genomic_DNA.
DR AlphaFoldDB; B9SB57; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; B9SB57; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 162..185
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 277..294
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 306..329
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 100..134
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 202..236
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 305..339
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 340..374
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 488 AA; 54682 MW; 5C7F334C468D736D CRC64;
MQVPLLILAP RGTRKPRLFN KLFTTWTAPP PRATCLISHY FSLLHSSPDL THLRHLHARL
LRTSLYDNVV LSSKLVLMYS HHNRLTPHSL STFFHMPCKN IYSWNIIIGE FARSNLPEKS
VDLFIDMRRD SHFQPDDFSL PLVLRACAGS GLGKLGSSVH GLCVKMGLAV SLFVGSALVF
MYVTFGNVSN ARVVFDEMAK RDSVLWTALL SGYAQNGEPK LGLQVFREMV DNSTRVKLDW
VVMVSLLLVC GQLGSLKHGK SVHGWCVRNC LRLELSLGNA IVHMYIKCGM LAYAHRFFDK
MPERDVFSWS SLILGYGLSG NVSVALCLFD QMHMRGIKPN DVTFLGILSA CGHGGLVEQA
RSYFKMMQNY GLVAELRHYA TIVDCLARAG RFEEAEKFIS DIPMEPDEAV LGAILAGCRV
HNNVEVGERI AKRLIRLKPE KAGYYVLLAN MYAGVGRFHE AEMVRDSMQE KNMSKVPGCS
LLESKSCF
//