ID B9SMD1_RICCO Unreviewed; 874 AA.
AC B9SMD1;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE SubName: Full=Pentatricopeptide repeat-containing protein, putative {ECO:0000313|EMBL:EEF35232.1};
GN ORFNames=RCOM_0512950 {ECO:0000313|EMBL:EEF35232.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; EQ974029; EEF35232.1; -; Genomic_DNA.
DR RefSeq; XP_002527150.1; XM_002527104.2.
DR AlphaFoldDB; B9SMD1; -.
DR STRING; 3988.B9SMD1; -.
DR GeneID; 8281450; -.
DR KEGG; rcu:8281450; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; B9SMD1; -.
DR OrthoDB; 455715at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47938:SF21; OS02G0827900 PROTEIN; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 5.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 111..145
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 146..180
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 181..215
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 216..250
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 290..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 325..359
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 360..394
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 395..429
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 430..464
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 465..499
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 523..557
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 558..592
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 593..627
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 628..662
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 874 AA; 97878 MW; 55A224DBAF5C7C1D CRC64;
MDPTTKLTKA LLNNAHNPKL AWHLFKRILS LPISSNHRSQ SIPIISRILI RSKMFNELDD
LHQLLLNSPS LESSDSSLEN LVTVLAKSGF FNKAISHFKS LRSNFPEKQP SIYLYNVLLK
SCIRENRVEL VSWLYKDMVL ARVSPEAYTF NLLIGLLCDS GHLEDARELF DKMPARGCEP
NEFTFGILVR GYCRAGLASK GLELLGQMRT MGILPNNVLY NTLISSFCKE GKTHDAEKLV
DKMREDGLVP HVETFNSRIS ALCGSGKILE ASRIFRDMQI DEELGLPHPN VITYKLMLMG
FCKEGMLEEA KTLVDTMKRN ANFINLESYN IWLLGLIRNG KLLEAWIVLK EMLGIGIEPD
IYSYNIVMDG LCKNGMLSDA RMLMGLMIRN GILPDTVTYS TLLHGYCSKG KVFEANNLLH
EMISNNCSPN TYTCNVLLHS LWKEGRISEA ENLLQKMNEK GYGVDTVTCN IIINALCNNG
QLDKAIEIVN GMWTHGSAAL GNLGNSFIGL VDDTISGKKC TPDLVTYSTI ISGLCKAGRL
DDAKKKFIEM MSKGLQPDSA IYDTFIHSFC REGKISSAFQ VLKDMEKRGC NKTLQTYNSL
ILGLGSKNQI FELYGLIDEM REKGVSPDVC TYNHMLNCLC EGGRINDAPS VLDEMLQKGI
SPNISSFRIL IKAFCKACDF KASHEVFEIA LNVCGHKEAL YTLMFNELLV GGKVAEAKEL
FETALDRSFD IGNFLYKDLI DRLCKDEKLE AASDVLHRLI DKGYQFDPAS FMPVIDGFGK
MGNKHVADEL AERMMEMASE SNKENKAYPN VKGHILRNKN KDAGNDWPII VHRDDGSGIA
LKALKRVQKG WGQGSISSLQ PQKLEFFDYW DGSG
//