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Database: UniProt
Entry: B9SMD1_RICCO
LinkDB: B9SMD1_RICCO
Original site: B9SMD1_RICCO 
ID   B9SMD1_RICCO            Unreviewed;       874 AA.
AC   B9SMD1;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   SubName: Full=Pentatricopeptide repeat-containing protein, putative {ECO:0000313|EMBL:EEF35232.1};
GN   ORFNames=RCOM_0512950 {ECO:0000313|EMBL:EEF35232.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; EQ974029; EEF35232.1; -; Genomic_DNA.
DR   RefSeq; XP_002527150.1; XM_002527104.2.
DR   AlphaFoldDB; B9SMD1; -.
DR   STRING; 3988.B9SMD1; -.
DR   GeneID; 8281450; -.
DR   KEGG; rcu:8281450; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   InParanoid; B9SMD1; -.
DR   OrthoDB; 455715at2759; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 13.
DR   PANTHER; PTHR47938:SF21; OS02G0827900 PROTEIN; 1.
DR   PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 3.
DR   Pfam; PF13041; PPR_2; 5.
DR   PROSITE; PS51375; PPR; 14.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          111..145
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          146..180
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          181..215
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          216..250
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          290..320
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          325..359
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          360..394
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          395..429
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          430..464
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          465..499
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          523..557
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          558..592
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          593..627
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          628..662
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   874 AA;  97878 MW;  55A224DBAF5C7C1D CRC64;
     MDPTTKLTKA LLNNAHNPKL AWHLFKRILS LPISSNHRSQ SIPIISRILI RSKMFNELDD
     LHQLLLNSPS LESSDSSLEN LVTVLAKSGF FNKAISHFKS LRSNFPEKQP SIYLYNVLLK
     SCIRENRVEL VSWLYKDMVL ARVSPEAYTF NLLIGLLCDS GHLEDARELF DKMPARGCEP
     NEFTFGILVR GYCRAGLASK GLELLGQMRT MGILPNNVLY NTLISSFCKE GKTHDAEKLV
     DKMREDGLVP HVETFNSRIS ALCGSGKILE ASRIFRDMQI DEELGLPHPN VITYKLMLMG
     FCKEGMLEEA KTLVDTMKRN ANFINLESYN IWLLGLIRNG KLLEAWIVLK EMLGIGIEPD
     IYSYNIVMDG LCKNGMLSDA RMLMGLMIRN GILPDTVTYS TLLHGYCSKG KVFEANNLLH
     EMISNNCSPN TYTCNVLLHS LWKEGRISEA ENLLQKMNEK GYGVDTVTCN IIINALCNNG
     QLDKAIEIVN GMWTHGSAAL GNLGNSFIGL VDDTISGKKC TPDLVTYSTI ISGLCKAGRL
     DDAKKKFIEM MSKGLQPDSA IYDTFIHSFC REGKISSAFQ VLKDMEKRGC NKTLQTYNSL
     ILGLGSKNQI FELYGLIDEM REKGVSPDVC TYNHMLNCLC EGGRINDAPS VLDEMLQKGI
     SPNISSFRIL IKAFCKACDF KASHEVFEIA LNVCGHKEAL YTLMFNELLV GGKVAEAKEL
     FETALDRSFD IGNFLYKDLI DRLCKDEKLE AASDVLHRLI DKGYQFDPAS FMPVIDGFGK
     MGNKHVADEL AERMMEMASE SNKENKAYPN VKGHILRNKN KDAGNDWPII VHRDDGSGIA
     LKALKRVQKG WGQGSISSLQ PQKLEFFDYW DGSG
//
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