ID B9SVQ9_RICCO Unreviewed; 362 AA.
AC B9SVQ9;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN ORFNames=RCOM_0009800 {ECO:0000313|EMBL:EEF32318.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; EQ974173; EEF32318.1; -; Genomic_DNA.
DR RefSeq; XP_002530078.1; XM_002530032.2.
DR AlphaFoldDB; B9SVQ9; -.
DR STRING; 3988.B9SVQ9; -.
DR GeneID; 8268000; -.
DR KEGG; rcu:8268000; -.
DR eggNOG; ENOG502QTFQ; Eukaryota.
DR InParanoid; B9SVQ9; -.
DR OrthoDB; 4793at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044790; MD26C-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR47210; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED; 1.
DR PANTHER; PTHR47210:SF1; OS12G0165700 PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000008311}.
FT DOMAIN 133..204
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 71..123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 208..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 342..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..122
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 256..270
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 293..312
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 362 AA; 40651 MW; A05A227DCC89FF7C CRC64;
MDVDDFRSIL ESSGVDVWTF IDTAIVVASL DFGNELKQRR DKIVEMLYSS SGRCRNCDLD
VGRINNGHEI KERSHLESKG GGGGGSGSPS TTPRSIHGDE DVDVVNDDDD DDDDDDGLDP
YAGLFDDEQK KILEIKQHLE DPDQSEDSLV DLLQSLADMD ITFKALKETD IGRHVNQLRK
HTSNDVRRLV KQLVRKWKDI VDEWVKLNPP GQHASSGLMA DGDSPRQKFP QNGHHQVPDF
AYSPNPHNGS SGSDKNNSEP ERRPKPVPRK EAPPRPAQQS VPVSASASHI VQRQREQQRE
NNFDSDRLAS ARKRLQANYK EAENAKKQRT IQVMDIHELP KPKNKNTFFA KNKGGGSQGR
HW
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