ID   B9SZQ3_RICCO            Unreviewed;       349 AA.
AC   B9SZQ3;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   27-MAR-2024, entry version 46.
DE   RecName: Full=RNase H type-1 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=RCOM_0006440 {ECO:0000313|EMBL:EEF30922.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
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DR   EMBL; EQ974282; EEF30922.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9SZQ3; -.
DR   InParanoid; B9SZQ3; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR026960; RVT-Znf.
DR   PANTHER; PTHR46736:SF107; RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEIN; 1.
DR   PANTHER; PTHR46736; ZF-RVT DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008311}.
FT   DOMAIN          127..206
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          253..322
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   349 AA;  39300 MW;  E971395DF080F315 CRC64;
     MDGNTNSYHR LVVKSSSNQS LQLYLVMWVL SNSPNRSARS STVFSQGFGG MVVLRSIGLR
     KNIENGQITW IWEEKWIPSL PGFSISTPKT DNLEVVRVCD LMDASNKAWD RMNVLESPWS
     SHPQSSSSSN QNLCKYIWNS KAPPMIRNFL RRAATNSLLM GTQQLPVQHN LFKRKAASSP
     QCQICGQDEE TVEQMLFFCS HALETWFLCP LASLHLQHGG VVYMILLAIK WKTTSYLLLF
     SPAAYVLREA CYFAIRIGGV KVSFETDSKV VTDAIKMVDM PIRWDLDSII SDIQRVLASF
     EAATIDYINM KANTAADWLE QSCFSSACSN LWLSVPPKEL GEILYSDAL
//