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Database: UniProt
Entry: B9T7A8_RICCO
LinkDB: B9T7A8_RICCO
Original site: B9T7A8_RICCO 
ID   B9T7A8_RICCO            Unreviewed;       677 AA.
AC   B9T7A8;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 80.
DE   SubName: Full=Ubiquitin ligase protein cop1, putative {ECO:0000313|EMBL:EEF28255.1};
DE            EC=1.3.1.74 {ECO:0000313|EMBL:EEF28255.1};
GN   ORFNames=RCOM_0002700 {ECO:0000313|EMBL:EEF28255.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
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DR   EMBL; EQ974729; EEF28255.1; -; Genomic_DNA.
DR   RefSeq; XP_002534127.1; XM_002534081.2.
DR   AlphaFoldDB; B9T7A8; -.
DR   STRING; 3988.B9T7A8; -.
DR   GeneID; 8266405; -.
DR   KEGG; rcu:8266405; -.
DR   eggNOG; KOG0297; Eukaryota.
DR   InParanoid; B9T7A8; -.
DR   OrthoDB; 21736at2759; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0032440; F:2-alkenal reductase [NAD(P)+] activity; IEA:UniProtKB-EC.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR   GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   CDD; cd16504; RING-HC_COP1; 1.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR042755; COP1.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   PANTHER; PTHR44080; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR   PANTHER; PTHR44080:SF7; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR   Pfam; PF00400; WD40; 4.
DR   Pfam; PF13923; zf-C3HC4_2; 1.
DR   SMART; SM00184; RING; 1.
DR   SMART; SM00320; WD40; 6.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 2.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils}; Ligase {ECO:0000313|EMBL:EEF28255.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Oxidoreductase {ECO:0000313|EMBL:EEF28255.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00175}.
FT   DOMAIN          53..91
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   REPEAT          461..493
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          547..587
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REGION          257..285
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          139..203
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   677 AA;  76510 MW;  74E201F751A63B8D CRC64;
     MEEVSTGAIV PAVKLEPRPS SSSVAVAAAV SSEPAAAAEE EAGLSELEKD FLCPICMQII
     KDAFLTACGH SFCYMCIITH LRNKSDCPCC THYLTTNQLF PNFLLQKLLK KASARQTSKT
     ASPVEHFRHA LQQGCEISIK ELDTLMSMLS EKKRKMEQEE AERNMQILLD FLHYLRKQKV
     DELNEVRTDL QFIKEDIEAV EKHRIELYHA RDRYSMKLRM LGDDPNARKP WSPTIEKSNG
     GVISNAFNVR GGMITGNLPT KKMDGKAQVS SHGLQRKDSL SGSDSQFNHS GLSVVRKKRV
     HAQFNDLQEC YLQKRRQMAN QLHNQQDKDK NVMHREGYST GLLDFQSVLS TFTQYSRLRV
     IAELRHGDIF HSANIVSSIE FDRDDELFAT AGVSRRIKVF DFSTVLNDPA DVHCPVEEMS
     TRSKLSCLSW NKYAKNQIAS SDYEGIVTVW DVTTRQSVME YEEHEKRAWS VDFSRTEPSM
     LVSGSDDCKV KVWCTNQEAS VLNIDMKANI CCVKYNPGSS NYIAVGSADH HIHYYDLRNV
     SHPLHVFSGH RKAVSYVKFL SNSELASAST DSTLRLWDVK ENLPVRTFRG HTNEKNFVGL
     SVNRDYIACG SETNEVYVYH KEISRPVTWH RFGSPEMDDA DEDAGSYFIS AVCWKSDSPT
     MLTANSQGTI KVLVLAA
//
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