GenomeNet

Database: UniProt
Entry: B9TM53_RICCO
LinkDB: B9TM53_RICCO
Original site: B9TM53_RICCO 
ID   B9TM53_RICCO            Unreviewed;       121 AA.
AC   B9TM53;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   22-FEB-2023, entry version 41.
DE   RecName: Full=HTH gntR-type domain-containing protein {ECO:0000259|PROSITE:PS50949};
DE   Flags: Fragment;
GN   ORFNames=RCOM_2047110 {ECO:0000313|EMBL:EEF23062.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; EQ988166; EEF23062.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9TM53; -.
DR   InParanoid; B9TM53; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR46577; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR   PANTHER; PTHR46577:SF2; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF00392; GntR; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008311}.
FT   DOMAIN          16..84
FT                   /note="HTH gntR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50949"
FT   NON_TER         121
FT                   /evidence="ECO:0000313|EMBL:EEF23062.1"
SQ   SEQUENCE   121 AA;  13621 MW;  9AADA0DE5DB4E810 CRC64;
     MPVSQPLITI NPQDPVPLVE QIVSGVKQLI EQRVLRTGTR LPSIRDFAVQ HHISRFTVVD
     AYDRLVALGY LLSRRGSGFY VAPLNKPEET VSSTSYLNRA DDVLWLLHNT FRDVPDAIRP
     G
//
DBGET integrated database retrieval system