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Database: UniProt
Entry: B9UEN8_9HIV1
LinkDB: B9UEN8_9HIV1
Original site: B9UEN8_9HIV1 
ID   B9UEN8_9HIV1            Unreviewed;       288 AA.
AC   B9UEN8;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   SubName: Full=Pol protein {ECO:0000313|EMBL:ACF37730.1};
DE   Flags: Fragment;
GN   Name=pol {ECO:0000313|EMBL:ACF37730.1};
OS   Human immunodeficiency virus 1.
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
OX   NCBI_TaxID=11676 {ECO:0000313|EMBL:ACF37730.1};
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1] {ECO:0000313|EMBL:ACF37730.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=635-3 {ECO:0000313|EMBL:ACF37730.1};
RX   PubMed=18931623; DOI=10.1097/QAI.0b013e31818a6561;
RA   Brennan C.A., Bodelle P., Coffey R., Devare S.G., Golden A., Hackett J.Jr.,
RA   Harris B., Holzmayer V., Luk K.C., Schochetman G., Swanson P.,
RA   Yamaguchi J., Vallari A., Ndembi N., Ngansop C., Makamche F., Mbanya D.,
RA   Gurtler L.G., Zekeng L., Kaptue L.;
RT   "The Prevalence of Diverse HIV-1 Strains Was Stable in Cameroonian Blood
RT   Donors From 1996 to 2004.";
RL   J. Acquir. Immune Defic. Syndr. 0:0-0(2008).
RN   [2] {ECO:0000313|EMBL:ACF37730.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=635-3 {ECO:0000313|EMBL:ACF37730.1};
RA   Brennan C.;
RL   Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; EU618271; ACF37730.1; -; Genomic_RNA.
DR   GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.10.200; -; 1.
DR   Gene3D; 2.30.30.10; Integrase, C-terminal domain superfamily, retroviral; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR017856; Integrase-like_N.
DR   InterPro; IPR036862; Integrase_C_dom_sf_retrovir.
DR   InterPro; IPR001037; Integrase_C_retrovir.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR003308; Integrase_Zn-bd_dom_N.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR41694; ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEIN; 1.
DR   PANTHER; PTHR41694:SF3; INTEGRASE-RELATED; 1.
DR   Pfam; PF00552; IN_DBD_C; 1.
DR   Pfam; PF02022; Integrase_Zn; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF50122; DNA-binding domain of retroviral integrase; 1.
DR   SUPFAM; SSF46919; N-terminal Zn binding domain of HIV integrase; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS51027; INTEGRASE_DBD; 1.
DR   PROSITE; PS50876; ZF_INTEGRASE; 1.
PE   4: Predicted;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Multifunctional enzyme {ECO:0000256|ARBA:ARBA00023268};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW   Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00450}.
FT   DOMAIN          3..44
FT                   /note="Integrase-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50876"
FT   DOMAIN          54..204
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   DOMAIN          223..270
FT                   /note="Integrase-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51027"
FT   DNA_BIND        223..270
FT                   /note="Integrase-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00506"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ACF37730.1"
FT   NON_TER         288
FT                   /evidence="ECO:0000313|EMBL:ACF37730.1"
SQ   SEQUENCE   288 AA;  32255 MW;  D2AB6A5949A25BA9 CRC64;
     FLDGIDKAQE EHERYHSNWR AMAGDFNLPP VVAKEIVASC DKCQLKGEAM HGQVDCSPGI
     WQLDCTHLEG KIILVAVHVA SGYIEAEVIP AETGQETAYF ILKLAGRWPV KVIHTDNGSN
     FTSAAVKAAC WWANVTQEFG IPYNPQSQGV VESMNKELKK IIGQVRDQAE HLKTAVQMAV
     FIHNFKRKGG IGGYSAGERI IDIIATDIQT KELQKQITKI QNFRVYFRDS RDPIWKGPAK
     LLWKGEGAVV IQYNSEIKVV PRRKAKIIRD YGKQMAGDDC MAGRQEED
//
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