ID B9ZZS6_9TOMB Unreviewed; 376 AA.
AC B9ZZS6;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 13-SEP-2023, entry version 23.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE AltName: Full=Coat protein {ECO:0000256|ARBA:ARBA00031336};
DE AltName: Full=p41 {ECO:0000256|ARBA:ARBA00031782};
OS Grapevine Algerian latent virus.
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC Tombusvirus algeriaense.
OX NCBI_TaxID=208084 {ECO:0000313|EMBL:BAH30150.1};
RN [1] {ECO:0000313|EMBL:BAH30150.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Limo-08 {ECO:0000313|EMBL:BAH30150.1};
RX DOI=10.1007/s10327-009-0144-6;
RA Fujinaga M., Ogiso H., Wakabayashi H., Morikawa T., Natsuaki T.;
RT "First report of a Grapevine Algerian latent virus disease on statice
RT plants (Limonium sinuatum) in Japan.";
RL J. Gen. Plant Pathol. 75:157-159(2009).
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC capsid proteins. {ECO:0000256|ARBA:ARBA00002495}.
CC -!- SUBUNIT: Homomultimer. {ECO:0000256|ARBA:ARBA00011553}.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; AB461854; BAH30150.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:BAH30150.1};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 67..257
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
SQ SEQUENCE 376 AA; 39751 MW; 0DFA13D172FC5ACE CRC64;
MALALNTRRN NNGKVMEMLA YKAATAGAEL ALANVGSITR GVAQLGKSMM GKKKRNKNVS
QVGALGGAVV APVAVTRQIR GSKPRFSGRG TGSITVTHRE YLGQVVTTAD LQVNGGITGN
LLKVNPLNGI LFSWLPTIAA GYDQYAFNRL SLQYVPLCAT TATGRVAMYW DKDSTDLEPT
DRVELANQAI LKETSPWAEA NLTIPTDRIK RFCDDSAVAD RKLVDLGQLG VATYGGTAVV
AGDVFVSYTV TFYNPQPLAT LMDTTRINAS NTVITNVGPQ YSRIDVVSGN QWLITFRGVG
KFVIFGSIRG TGAVVLALSG VIVNSSTTLT TPTGAMYVAN VTVSSLPASV SYTMTTVTAG
LHSAVRATRA NDMGTP
//