ID C0CZP3_9FIRM Unreviewed; 915 AA.
AC C0CZP3;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEG55450.1};
GN ORFNames=CLOSTASPAR_02470 {ECO:0000313|EMBL:EEG55450.1};
OS [Clostridium] asparagiforme DSM 15981.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Enterocloster.
OX NCBI_TaxID=518636 {ECO:0000313|EMBL:EEG55450.1, ECO:0000313|Proteomes:UP000004756};
RN [1] {ECO:0000313|EMBL:EEG55450.1, ECO:0000313|Proteomes:UP000004756}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15981 {ECO:0000313|EMBL:EEG55450.1,
RC ECO:0000313|Proteomes:UP000004756};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEG55450.1, ECO:0000313|Proteomes:UP000004756}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15981 {ECO:0000313|EMBL:EEG55450.1,
RC ECO:0000313|Proteomes:UP000004756};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Clostridium asparagiforme (DSM 15981).";
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEG55450.1}.
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DR EMBL; ACCJ01000144; EEG55450.1; -; Genomic_DNA.
DR RefSeq; WP_007710656.1; NZ_GG657591.1.
DR AlphaFoldDB; C0CZP3; -.
DR HOGENOM; CLU_000445_70_66_9; -.
DR Proteomes; UP000004756; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF70; CYCLIC DI-GMP PHOSPHODIESTERASE PDEH; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 159..179
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 522..647
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 654..908
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 915 AA; 105593 MW; E86C35474AEB9346 CRC64;
MKKMIAKLGG ILVPIIFCIA LIYTATMSLN LTDDLQGNAR VINYIGIVRG ATQRLIKKEL
NHDPDDELIL YLDHILLGLS NGSEELNLIK LDSEEFQTRL IEMRDDWEDL KVQIDQYREG
ASSQLLYELS EDYFKLANDT VFTAEEYTEQ TVQHARTSLV TANFIFILMA IGSSVFTFYQ
EKRQIKLIEA EKENIKRSEQ LSKRAQELMA PMNEISELMY VSDMDTYNLL FVNEAGKRMF
QVDDSLPNLK CYKVLQGFEE PCPFCTNQFL KLDETYSWEY TNPIIKKHYL LKDRLIEWDG
RIARMEIAFD ITEANNEKNE LKRRLERDDI RLACVRELYN NRDIENAITK VLEYIGKLFL
AERSYVFLFH DNYYSNIAEW CKEGILPEID NLQNIPIGDY QVWLDELEKH KKVVINDVEE
IKDSFHVGYE LLTQQGIRNI IWVPLIKNGT VNGTIGLDNQ DLGMAEIAVP FLQTVQYFLS
LTMQRNENEK MLFELSQIDR LTSFYNRNRF IQDVSELKER KASVGVVYLD INGLKETNDS
FGHDAGDKLI KACADIMKKS AASKNLYRIG GDEFVIIYLD IAKGDFYDKV QLLKNAFEKS
ACQAAIGCKW SEESADIQEI IKEADELMYS DKKKFYQGHH ATGRYRHNND VLRFLADPDV
LKQKIENHEF TVYLQAKIDV EGGRMAGAEA LIRYRDENGS IVAPDRFIPV LEDTYLISKI
DYYVFEEVCK ALSAWNQQGK SGITVSSNFS RITFMEDQFV KRIEAISEKY HVQRKYLEIE
ITESAKVTDL DTLVARIDQM RNSGFSVAMD DFGVESSNLA MLSFVKIDVL KIDKSFVKDI
VTNKRAQIII GTMTEMCEEM GIQLIAEGIE DEQQLDVVRE YGVKTVQGYL FSRPIPISEY
EEKYIKSPQA EIGGN
//