ID C0HBQ6_SALSA Unreviewed; 281 AA.
AC C0HBQ6;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Transposable element Tcb1 transposase {ECO:0000313|EMBL:ACN11475.1};
GN Name=TCB1 {ECO:0000313|EMBL:ACN11475.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ACN11475.1};
RN [1] {ECO:0000313|EMBL:ACN11475.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN11475.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA Koop B.F.;
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACN11475.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN11475.1};
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
RN [3] {ECO:0000313|EMBL:ACN11475.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN11475.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; BT059762; ACN11475.1; -; mRNA.
DR AlphaFoldDB; C0HBQ6; -.
DR OMA; WCKAHRH; -.
DR Bgee; ENSSSAG00000055337; Expressed in nose and 11 other cell types or tissues.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR002492; Transposase_Tc1-like.
DR PANTHER; PTHR23022:SF138; TRANSPOSABLE ELEMENT TC3 TRANSPOSASE; 1.
DR PANTHER; PTHR23022; TRANSPOSABLE ELEMENT-RELATED; 1.
DR Pfam; PF01498; HTH_Tnp_Tc3_2; 1.
PE 2: Evidence at transcript level;
FT DOMAIN 19..81
FT /note="Transposase Tc1-like"
FT /evidence="ECO:0000259|Pfam:PF01498"
SQ SEQUENCE 281 AA; 31978 MW; 4E4385AECAE4478C CRC64;
MAQPRSGRPH KLTGQTSAIA RRNRLSSVAT LTTEFQTASG SNVSARTVHR ELHEMGFHGR
GAAHKPKISM HNAKRRLECC KACRQWTLEQ WKHVLWSDES CFTNWQCDGQ IWVWRMPGER
SQPQCIVPTV KFGGRGLMVW GCFSWFGLVP LVPVKGNLNA TAYNDILDDS VLPTFVATVY
ALVHKARSIQ KWFVEIGVEE LDWPAQSPDL KPIKHRWDEL ERVCEPGLIA QRHCPTSLML
VVEWKQVPAA MFQHLVESLP RREKAIIAVK GDQHHINAHD V
//
