ID C0HG42_MAIZE Unreviewed; 536 AA.
AC C0HG42;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 24-JAN-2024, entry version 77.
DE SubName: Full=Putative pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:ONM32881.1};
GN Name=100381451 {ECO:0000313|EnsemblPlants:Zm00001eb135240_P001};
GN ORFNames=ZEAMMB73_Zm00001d041380 {ECO:0000313|EMBL:ONM32881.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACN25995.1};
RN [1] {ECO:0000313|EMBL:ACN25995.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACN25995.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:ONM32881.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb135240_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM32881.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb135240_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb135240_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BT061298; ACN25995.1; -; mRNA.
DR EMBL; CM007649; ONM32881.1; -; Genomic_DNA.
DR RefSeq; NP_001309741.1; NM_001322812.1.
DR RefSeq; XP_008673060.1; XM_008674838.1.
DR RefSeq; XP_008673061.1; XM_008674839.1.
DR AlphaFoldDB; C0HG42; -.
DR SMR; C0HG42; -.
DR IntAct; C0HG42; 5.
DR STRING; 4577.C0HG42; -.
DR PaxDb; 4577-GRMZM2G059703_P02; -.
DR EnsemblPlants; Zm00001eb135240_T001; Zm00001eb135240_P001; Zm00001eb135240.
DR GeneID; 100381451; -.
DR Gramene; Zm00001eb135240_T001; Zm00001eb135240_P001; Zm00001eb135240.
DR KEGG; zma:100381451; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_21_1; -.
DR InParanoid; C0HG42; -.
DR OMA; IGGWSRF; -.
DR OrthoDB; 450729at2759; -.
DR Proteomes; UP000007305; Chromosome 3.
DR ExpressionAtlas; C0HG42; baseline and differential.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR46128:SF346; -; 1.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 6.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 244..278
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 279..313
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 349..383
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 419..453
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 454..488
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 536 AA; 59765 MW; 2556236F8B349B5F CRC64;
MAAQRLLFLK CCRGYSTSAE DMVISSLRLI PSPSVSVTNP PPLPTILHST DSPPDPHPPL
TTMLLSAADR LRGVFLRKPS GRNVLHQALS STGIGATMAL SPEVLANVVN TSNLSGAATV
TYFDWAVTNS KPPPSVHTCN IVIRALGRKK FFDYLDDALQ IMRRNNIFPD LTTLEIIMDS
LVAARHVSRA VEVISTDQFG FGIGKTCHRK DAFTILIRCL CRRSHVGLAS SLLQAARKEL
FGLDSNVYND VMGGWARFGS VDKLQEVWTK MQEDGLVPNE VSHCHLIEGL GRVGQTEDAL
KAFEYMVHER YGPTTMAYNV LIFNFIHIGD LDSCIKYYKD MLDKNCSPNI ETYSKMIKAF
LRGRRVADAL QMFDDMLIQG VLPNTGMITS FINPLCTFGP PHAALMIYKK SRKAGCVISL
KAYKLLLERL AKFGKSGIVL DIWEEMQECG YQPDKEIYEF IVNGLCNVGK VDAAVSVVEE
SLRNGFCLGR VVYSKLNNKL LEMDKVETAY NLFKKVKHAR ALTNSRNYCR ANGWHF
//