GenomeNet

Database: UniProt
Entry: C0KIC5_TASV2
LinkDB: C0KIC5_TASV2
Original site: C0KIC5_TASV2 
ID   C0KIC5_TASV2            Unreviewed;       261 AA.
AC   C0KIC5;
DT   05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   05-MAY-2009, sequence version 1.
DT   08-NOV-2023, entry version 47.
DE   RecName: Full=Non-structural polyprotein 1AB {ECO:0000256|ARBA:ARBA00019743};
DE   Flags: Fragment;
OS   Turkey astrovirus 2 (TAstV-2).
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Stellavirales; Astroviridae; Avastrovirus; Avastrovirus 3.
OX   NCBI_TaxID=246343 {ECO:0000313|EMBL:ACM90312.1};
OH   NCBI_TaxID=9103; Meleagris gallopavo (Wild turkey).
RN   [1] {ECO:0000313|EMBL:ACM90312.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=TK/MN/B1016/08 {ECO:0000313|EMBL:ACM90312.1};
RA   Jindal N., Patnayak D.P., Chander Y., Ziegler A.F., Goyal S.M.;
RT   "Detection and molecular characterization of enteric viruses in breeder
RT   turkeys.";
RL   Avian Pathol. 39:53-61(2010).
CC   -!- FUNCTION: Contains the viral protease participating in the cleavage of
CC       the polyprotein into functional products. It contains also the
CC       activities necessary for replication of genomic RNA, as well as
CC       transcription of subgenomic mRNA. {ECO:0000256|ARBA:ARBA00029407}.
CC   -!- SUBCELLULAR LOCATION: Host membrane {ECO:0000256|ARBA:ARBA00004301};
CC       Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004301}.
CC   -!- SIMILARITY: Belongs to the astroviridae polyprotein 1AB family.
CC       {ECO:0000256|ARBA:ARBA00005873}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FJ605163; ACM90312.1; -; Genomic_RNA.
DR   GO; GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR   CDD; cd23172; ps-ssRNAv_Astroviridae_RdRp; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR001205; RNA-dir_pol_C.
DR   InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR   Pfam; PF00680; RdRP_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE   3: Inferred from homology;
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Ribosomal frameshifting {ECO:0000256|ARBA:ARBA00022758};
KW   RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Viral RNA replication {ECO:0000256|ARBA:ARBA00022953}.
FT   DOMAIN          24..158
FT                   /note="RdRp catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50507"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ACM90312.1"
FT   NON_TER         261
FT                   /evidence="ECO:0000313|EMBL:ACM90312.1"
SQ   SEQUENCE   261 AA;  30461 MW;  EF763FBAFABB8A87 CRC64;
     QVGWTPFFGG LDRRVRRLCG DGDRYFVEMD WTRYDGTIPK SLFWRIRQIR FFFLHDSHKT
     PKMRRLYNWY VKNLLEKIIL LPTGEVCQVK KGNPSGQYST TVDNNMINVW LTTFEVSYLF
     FKQRGRLPTE KELQENCSMI CYGDDRLLSI RKGFVEYEPD TVIEMYKSIF GMWVKRSNIK
     IQDTPEGLSF CGLTIVKSSA GAYVGVPNVN KILSTLENPV RRLPDVESLW GKLVSLRILC
     ENAPSNVKHF LDEQISNVEE F
//
DBGET integrated database retrieval system