GenomeNet

Database: UniProt
Entry: C0N9H1_9GAMM
LinkDB: C0N9H1_9GAMM
Original site: C0N9H1_9GAMM 
ID   C0N9H1_9GAMM            Unreviewed;        68 AA.
AC   C0N9H1;
DT   05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   05-MAY-2009, sequence version 1.
DT   27-MAR-2024, entry version 60.
DE   SubName: Full='Cold-shock' DNA-binding domain, putative {ECO:0000313|EMBL:EEF78684.1};
GN   ORFNames=MDMS009_2857 {ECO:0000313|EMBL:EEF78684.1};
OS   Methylophaga thiooxydans DMS010.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC   Piscirickettsiaceae; Methylophaga.
OX   NCBI_TaxID=637616 {ECO:0000313|EMBL:EEF78684.1, ECO:0000313|Proteomes:UP000004679};
RN   [1] {ECO:0000313|EMBL:EEF78684.1, ECO:0000313|Proteomes:UP000004679}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DMS010 {ECO:0000313|EMBL:EEF78684.1,
RC   ECO:0000313|Proteomes:UP000004679};
RX   PubMed=21478352; DOI=10.1128/JB.00388-11;
RA   Boden R., Ferriera S., Johnson J., Kelly D.P., Murrell J.C., Schafer H.;
RT   "Draft genome sequence of the chemolithoheterotrophic, halophilic
RT   methylotroph Methylophaga thiooxydans DMS010.";
RL   J. Bacteriol. 193:3154-3155(2011).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GG657906; EEF78684.1; -; Genomic_DNA.
DR   RefSeq; WP_007145321.1; NZ_GG657906.1.
DR   AlphaFoldDB; C0N9H1; -.
DR   HOGENOM; CLU_117621_6_1_6; -.
DR   OrthoDB; 9810590at2; -.
DR   Proteomes; UP000004679; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:UniProt.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd04458; CSP_CDS; 1.
DR   Gene3D; 6.20.370.130; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR012156; Cold_shock_CspA.
DR   InterPro; IPR011129; CSD.
DR   InterPro; IPR019844; CSD_1.
DR   InterPro; IPR002059; CSP_DNA-bd.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR   PANTHER; PTHR11544:SF60; LD37574P; 1.
DR   Pfam; PF00313; CSD; 1.
DR   PIRSF; PIRSF002599; Cold_shock_A; 1.
DR   PRINTS; PR00050; COLDSHOCK.
DR   SMART; SM00357; CSP; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS00352; CSD_1; 1.
DR   PROSITE; PS51857; CSD_2; 1.
PE   4: Predicted;
KW   Activator {ECO:0000256|ARBA:ARBA00023159};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   DNA-binding {ECO:0000313|EMBL:EEF78684.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004679}.
FT   DOMAIN          3..67
FT                   /note="CSD"
FT                   /evidence="ECO:0000259|PROSITE:PS51857"
SQ   SEQUENCE   68 AA;  7411 MW;  41F48BAD29B853D3 CRC64;
     MSTTTGTVKW FNEAKGFGFI EQESGPDVFA HFSQIKGDGF RTLNEGQRVE FTVTQGAKGP
     QAENITAL
//
DBGET integrated database retrieval system