ID C1BFF3_ONCMY Unreviewed; 193 AA.
AC C1BFF3;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 03-MAY-2023, entry version 38.
DE SubName: Full=High mobility group protein B1 {ECO:0000313|EMBL:ACO07756.1};
GN Name=HMGB1 {ECO:0000313|EMBL:ACO07756.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:ACO07756.1};
RN [1] {ECO:0000313|EMBL:ACO07756.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Red blood cell {ECO:0000313|EMBL:ACO07756.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Yasuike M., von Schalburg K., Cooper G., Leong J., Davidson W.S.,
RA Koop B.F.;
RT "Oncorhynchus mykiss ESTs and full-length cDNAs from Red Blood Cells.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; BT073332; ACO07756.1; -; mRNA.
DR AlphaFoldDB; C1BFF3; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd21978; HMG-box_HMGB_rpt1; 1.
DR CDD; cd21979; HMG-box_HMGB_rpt2; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 2.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR48112:SF28; HIGH MOBILITY GROUP BOX 1B; 1.
DR PANTHER; PTHR48112; HIGH MOBILITY GROUP PROTEIN DSP1; 1.
DR Pfam; PF00505; HMG_box; 1.
DR Pfam; PF09011; HMG_box_2; 1.
DR PRINTS; PR00886; HIGHMOBLTY12.
DR SMART; SM00398; HMG; 2.
DR SUPFAM; SSF47095; HMG-box; 2.
DR PROSITE; PS50118; HMG_BOX_2; 2.
PE 2: Evidence at transcript level;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267}.
FT DOMAIN 8..78
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 94..162
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 8..78
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 94..162
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 74..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 161..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..88
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..193
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 193 AA; 22157 MW; E4F786A20AFAF87E CRC64;
MGKDPRKPRG KMSSYAYFVQ TCRAEHKKKQ PEASVNFAEF SKKCSERWKP MSPKEKGTFE
DMAKQDKVRY EREMKNYIPP NGQKKKRFKD PNALKRPPSA FFIFCADFRA KIKSEHPGLS
IGDTAKKLGV MWNSSAAEEK KPYEKKAATL KEKYDKDIAS YRTNGRVDTA SSAAADDDDD
EDDEEDDDED DDE
//
