ID   C1DY40_MICCC            Unreviewed;       827 AA.
AC   C1DY40;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   27-MAR-2024, entry version 53.
DE   RecName: Full=XPG-I domain-containing protein {ECO:0000259|SMART:SM00484};
GN   ORFNames=MICPUN_56071 {ECO:0000313|EMBL:ACO61359.1};
OS   Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic
OS   green alga).
OC   Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC   Mamiellaceae; Micromonas.
OX   NCBI_TaxID=296587 {ECO:0000313|EMBL:ACO61359.1, ECO:0000313|Proteomes:UP000002009};
RN   [1] {ECO:0000313|EMBL:ACO61359.1, ECO:0000313|Proteomes:UP000002009}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RCC299 / NOUM17 {ECO:0000313|Proteomes:UP000002009};
RX   PubMed=19359590; DOI=10.1126/science.1167222;
RA   Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L.,
RA   Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E.,
RA   Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M.,
RA   Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H.,
RA   Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., Gready J.E.,
RA   John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., Moreau H.,
RA   Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., Piegu B.,
RA   Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., Zelensky A.,
RA   Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "Green evolution and dynamic adaptations revealed by genomes of the marine
RT   picoeukaryotes Micromonas.";
RL   Science 324:268-272(2009).
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DR   EMBL; CP001323; ACO61359.1; -; Genomic_DNA.
DR   RefSeq; XP_002500101.1; XM_002500055.1.
DR   AlphaFoldDB; C1DY40; -.
DR   STRING; 296587.C1DY40; -.
DR   GeneID; 8240817; -.
DR   KEGG; mis:MICPUN_56071; -.
DR   eggNOG; KOG2519; Eukaryota.
DR   InParanoid; C1DY40; -.
DR   OMA; DGVECEC; -.
DR   OrthoDB; 318721at2759; -.
DR   Proteomes; UP000002009; Chromosome 2.
DR   GO; GO:0004518; F:nuclease activity; IEA:InterPro.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 2.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   InterPro; IPR006086; XPG-I_dom.
DR   InterPro; IPR006084; XPG/Rad2.
DR   PANTHER; PTHR11081:SF54; FI23547P1; 1.
DR   PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR   Pfam; PF00867; XPG_I; 1.
DR   PRINTS; PR00853; XPGRADSUPER.
DR   SMART; SM00484; XPGI; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002009}.
FT   DOMAIN          165..239
FT                   /note="XPG-I"
FT                   /evidence="ECO:0000259|SMART:SM00484"
FT   REGION          9..31
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          546..568
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          607..827
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        614..633
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        658..676
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        687..706
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        716..732
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        812..827
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   827 AA;  89311 MW;  3BE1425C49E374A4 CRC64;
     MGITNLWCAP AVPAPPEPDT ASRFDAPPRR GNAKKLLDEE GAIVRVDGSD EDDPDAQRII
     RESVDGKALA VDLSLWIIQA CTQQALDEVY NEDLGFDDPD ASKTAKVVFE RALNYLRHGC
     VPVGVIDGQA PWQKLGALRA RWGAHAGGGG GAFGRCGEVA LEVLRALGLP GVEAPGEAEA
     TCAVMDSMGI VDGCVTSDGD SLLFGARTVF KTLRLSQNDQ RDLFMERVEA ADVGKRLMLG
     DDVEHVAPAL TALALLTGGD YDLTGAKNVG GTKALLVVKA LAKDEARRTR AEPGGRDRRQ
     RSLPARLDAF LASAPDPTIE ALDKCTGCAR CKHDGCLKNK VKNHVRGCSE CGTDAGCVER
     DGVECECPFH ARADERWLHK VRERANATDG YARSFRDAAR GYAAQARDAE EALGDASDVE
     WVERAENDGD EFDSFRKMRW RRRPDVAALQ EIMETYCQWE PRRTREKLLP VLVEWDMKAA
     RRALRRVEDP STVDPGRRWE LLRRRGVEFV VERIAKVSGN NKAPPWRYLL EVNSADPAHW
     AAWQRAATGD PAAGESAPKG GTAVLPPNFH ERGDDLAFLK GLAQRRSVRM SLVRETCPHL
     VARFDAGGSK AKSAPSTPAK SKSKPTTPRK TPKTVRGTKT RSPDQHDITS FFSQRRPAAP
     PSAPPSAPPS APLASTPAPR TPASKRKPPT EVGDDSAHDS DSDEILGAGL RPDLGAVRRL
     EAKKKLSFVA TEEEAQDEGL ASPARPKSSA VNVVDLRTPP GSPARTPAPD SSRKGRPGGA
     PASPAPRSPL FSPTKKARQA TLFECLSPKK AATPSQPETV DLCTPQK
//