ID C1N6F1_MICPC Unreviewed; 473 AA.
AC C1N6F1;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EEH52657.1};
GN ORFNames=MICPUCDRAFT_42844 {ECO:0000313|EMBL:EEH52657.1};
OS Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Mamiellaceae; Micromonas.
OX NCBI_TaxID=564608 {ECO:0000313|Proteomes:UP000001876};
RN [1] {ECO:0000313|EMBL:EEH52657.1, ECO:0000313|Proteomes:UP000001876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1545 {ECO:0000313|EMBL:EEH52657.1,
RC ECO:0000313|Proteomes:UP000001876};
RX PubMed=19359590; DOI=10.1126/science.1167222;
RA Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L.,
RA Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E.,
RA Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M.,
RA Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H.,
RA Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., Gready J.E.,
RA John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., Moreau H.,
RA Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., Piegu B.,
RA Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., Zelensky A.,
RA Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., Van de Peer Y.,
RA Grigoriev I.V.;
RT "Green evolution and dynamic adaptations revealed by genomes of the marine
RT picoeukaryotes Micromonas.";
RL Science 324:268-272(2009).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SF3A3 family.
CC {ECO:0000256|ARBA:ARBA00008776}.
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DR EMBL; GG663748; EEH52657.1; -; Genomic_DNA.
DR RefSeq; XP_003063521.1; XM_003063475.1.
DR AlphaFoldDB; C1N6F1; -.
DR STRING; 564608.C1N6F1; -.
DR GeneID; 9688768; -.
DR KEGG; mpp:MICPUCDRAFT_42844; -.
DR eggNOG; KOG2636; Eukaryota.
DR OMA; KDAHRRN; -.
DR OrthoDB; 5483967at2759; -.
DR Proteomes; UP000001876; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR000690; Matrin/U1-C_Znf_C2H2.
DR InterPro; IPR025086; SDE2-like_C_dom.
DR InterPro; IPR031774; SF3A3_dom.
DR InterPro; IPR024598; SF3a60/Prp9_C.
DR PANTHER; PTHR12786:SF2; SPLICING FACTOR 3A SUBUNIT 3; 1.
DR PANTHER; PTHR12786; SPLICING FACTOR SF3A-RELATED; 1.
DR Pfam; PF13297; SDE2_2C; 1.
DR Pfam; PF16837; SF3A3; 1.
DR Pfam; PF11931; SF3a60_Prp9_C; 1.
DR PROSITE; PS50171; ZF_MATRIN; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001876}.
FT DOMAIN 379..410
FT /note="Matrin-type"
FT /evidence="ECO:0000259|PROSITE:PS50171"
FT REGION 329..349
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 329..348
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 473 AA; 52817 MW; 770321C20B4A3AA9 CRC64;
MASTLLEQTR EAHEAIERLE RFIVSDFKTE AVTHKERLAQ NHRVNRALDE MASRAKRLRA
TYEDADGARK EEIAALGGGA NVFAAFYDRL RESREYHRAY SGFHAADPEQ TLVAPFRENV
AIAFSGEEAN GRYLDLHFAH RAFVNGAFGR KCEYISYLVD LGADGAFASS GGGKGGGDDA
DDTKTNNAMT PDRAKKFTRA YGEYLDGLLA YLGAFCLTLV PIRSRRRGVT AALKAAGLKA
GGTATERAAR LWSTRGRTLA DLDAKLFNKG LRPASAIDGA ERAKREARAK DIARREHFIA
ALLEHLSQVL DATKGNVEKK ATLSAAELEA EAEEDDDFVE EEASDEDEEV YNPLKLPLGW
DGKPIPYWLY KLHGLNLEFT CEICGNYSYW GRRAFEQHFK QFRHVHGMRC LGIPNTKAFA
EVTSIADALS LHKALDSRKD GKWDRKTDEE YEDADGNVYN KKTYEDLRKQ GLI
//