ID C2LIS2_PROMI Unreviewed; 1021 AA.
AC C2LIS2;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 03-APR-2013, entry version 15.
DE RecName: Full=Chondroitin sulfate ABC lyase;
DE AltName: Full=Chondroitin ABC eliminase;
DE AltName: Full=Chondroitin ABC lyase;
DE AltName: Full=Chondroitinase ABC;
GN ORFNames=HMPREF0693_1762;
OS Proteus mirabilis ATCC 29906.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC Enterobacteriaceae; Proteus.
OX NCBI_TaxID=525369;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ATCC 29906;
RA Qin X., Bachman B., Battles P., Bell A., Bess C., Bickham C.,
RA Chaboub L., Chen D., Coyle M., Deiros D.R., Dinh H., Forbes L.,
RA Fowler G., Francisco L., Fu Q., Gubbala S., Hale W., Han Y.,
RA Hemphill L., Highlander S.K., Hirani K., Hogues M., Jackson L.,
RA Jakkamsetti A., Javaid M., Jiang H., Korchina V., Kovar C., Lara F.,
RA Lee S., Mata R., Mathew T., Moen C., Morales K., Munidasa M.,
RA Nazareth L., Ngo R., Nguyen L., Okwuonu G., Ongeri F., Patil S.,
RA Petrosino J., Pham C., Pham P., Pu L.-L., Puazo M., Raj R., Reid J.,
RA Rouhana J., Saada N., Shang Y., Simmons D., Thornton R., Warren J.,
RA Weissenberger G., Zhang J., Zhang L., Zhou C., Zhu D., Muzny D.,
RA Worley K., Gibbs R.;
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Broad-specificity glycosaminoglycan lyase (By
CC similarity).
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 8 family.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data.
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DR EMBL; ACLE01000033; EEI48514.1; -; Genomic_DNA.
DR EnsemblBacteria; EEI48514; EEI48514; HMPREF0693_1762.
DR PATRIC; 36134048; VBIProMir92659_1030.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0016837; F:carbon-oxygen lyase activity, acting on polysaccharides; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 1.50.10.100; -; 1.
DR Gene3D; 2.60.120.410; -; 1.
DR Gene3D; 2.60.220.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR InterPro; IPR008929; Chondroitin_lyas.
DR InterPro; IPR024200; Chondroitinase_ABC_I.
DR InterPro; IPR011013; Gal_mutarotase_SF_dom.
DR InterPro; IPR008979; Galactose-bd-like.
DR InterPro; IPR014718; Glyco_hydro-type_carb-bd_sub.
DR InterPro; IPR011071; Lyase_8-like_C.
DR InterPro; IPR004103; Lyase_8_C.
DR InterPro; IPR003159; Lyase_8_central_dom.
DR InterPro; IPR012329; Lyase_8_N.
DR InterPro; IPR015177; Lyase_catalyt.
DR InterPro; IPR015176; Lyase_N.
DR Pfam; PF02278; Lyase_8; 1.
DR Pfam; PF02884; Lyase_8_C; 1.
DR Pfam; PF09093; Lyase_catalyt; 1.
DR Pfam; PF09092; Lyase_N; 1.
DR PIRSF; PIRSF034515; Chondroitinase; 1.
DR SUPFAM; SSF48230; Chondroitin_lyas; 1.
DR SUPFAM; SSF49785; Gal_bind_like; 1.
DR SUPFAM; SSF74650; Gal_mut_like; 1.
DR SUPFAM; SSF49863; Lyase_like_C; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Lyase.
SQ SEQUENCE 1021 AA; 115116 MW; 2EA5DD67A403681B CRC64;
MPIFRFTALA MTLGLLSTPY HVIAATSNPA FDPNHLMQSE IYHFAQSDPL ADFSSDKNST
LTLSDKRSIM GNQSLLWQWK GGSSFTLHKK LIVPTDKEAS KAWGRASTPV LSFWLYNEKP
IDGYLTVDLG EKLNATSEAQ AGFKVKLNFT GWRAIGISLN NDLENREMTL NATNTSSDGT
QDSIGRSLGA NVDSIRFKAP SNISQGEIYI DRIMFSIDDA RYQWSDYQIK TRLSEPEIEF
HTVQPQLPVT PENLAAIDLI RQRLINEFVG GEKETNLALE ENISKLKTDF EALNIRPLSD
GGMQGRHLIT DKQTIIYQPE QLNSQDKQLF DNYVILGNYT TLMFNISRAY VLEKDPTQKE
QLKQMYLLMT KHLLDQGFVK GSALVTTHHW GYSSRWWYIS TLLMADALKE ANLQTEVYDS
LLWYSREFKS SFDMKVGANS SDLDYFNTLS RQHLALLLLE PDDQKRINLV NSFNHYITGA
LTQVPPGSKD GLRPDGTAWR HEGNYPGYSF PAFKNASQLI YLLRETPFAV GESGWNNLKK
AMISAWIYSN PEVGLPLAGR HPFNSPSLQS IAQGYYWLAM SAQPAPDKQL ASIYLAISGK
SRNESPTIFG EEITPASLPQ GFYAFNGGAF GIHRWQDKMV TLKAYNTNVW SSEIYNKDNR
YGRYQSHGVA QIVRNGSQLS QGYQQEGWDW NRMPGATTIH LPLKELDSPN PHTLMQRGER
GFSGTSALEG KYGMMAFDLL YPANLARFDA NFTAKKTVLA ADNHLIFVGS NINSSDKDHP
VETTLFQHAI TPELNTIWIN GQKIEGFPYQ TTLKQGDWII DSNGNGYLIT QAEKVNVSRQ
HQTSAENKNR QPTQGNFSSA WIDHGIQPKD HSYEYMVFLD ATPEKMAQLA EKFRANNGLY
QVIRKDKDVH IIYDKLSQIT GYAFYQPAVI DDKWIKKVDK PSIVMTHQEG NILTVSAVTP
DLNMTRQKAA TPVTINVTVK GKWQPTAQDS EVKYNVSGDN TELIFTSYFG IPQEIKLSPL
S
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