ID C3JII7_RHOER Unreviewed; 470 AA.
AC C3JII7;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEN88731.1};
GN ORFNames=RHOER0001_1610 {ECO:0000313|EMBL:EEN88731.1};
OS Rhodococcus erythropolis SK121.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Rhodococcus; Rhodococcus erythropolis group.
OX NCBI_TaxID=596309 {ECO:0000313|EMBL:EEN88731.1, ECO:0000313|Proteomes:UP000005836};
RN [1] {ECO:0000313|EMBL:EEN88731.1, ECO:0000313|Proteomes:UP000005836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK121 {ECO:0000313|EMBL:EEN88731.1,
RC ECO:0000313|Proteomes:UP000005836};
RA Sebastian Y., Madupu R., Durkin A.S., Torralba M., Methe B., Sutton G.G.,
RA Strausberg R.L., Nelson K.E.;
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEN88731.1}.
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DR EMBL; ACNO01000020; EEN88731.1; -; Genomic_DNA.
DR RefSeq; WP_003941547.1; NZ_ACNO01000020.1.
DR AlphaFoldDB; C3JII7; -.
DR GeneID; 64139552; -.
DR Proteomes; UP000005836; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR NCBIfam; NF038139; Reg_Aceta_RamB; 1.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EEN88731.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 470 AA; 52922 MW; 54795B8C52BB594F CRC64;
MSKTFVGVRL RQLRTERGLS QASLAKTLEI SASYLNQIEH DVRPLTVPVL LRISEVFGVD
TTFFSPQDDT RLIAEMREVA LDQEMGIDAD AHEIAEMVST HPGLAKAMVN MHRRFRNTTA
QLAAATEDRF SDGSGSGSIT MPHEEVRDYF YQRQNYIHDL DTAAEELTAR MRFHRGDVAG
EIARRLESVH DVQIVRRVDL GENILHRYDP DTRVLEISAR LSGGQQVFKF ATELAYLEHG
DLLDSLVAEG NFTSEASVSL AKLGLANYFA AATVLPYSQF HEVAEDFRYD IERMSAFYSA
SYETICHRLS TLQRPKLRGV PFMFVRVDRA GNMSKRQSAT GFHFSTSGGT CPLWNVYETF
SYPGKIMPQI AQMPDGRRYL WVARTVERRA ARYGQPAKIF AIGLGCEIRH AHRLVYSDGL
DLDESNPGTP IGSGCRVCER LNCPQRAFPP LGKDLDISEH RSSISPYVIR
//
