ID C3T1I2_ECOLX Unreviewed; 564 AA.
AC C3T1I2;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 27-MAR-2024, entry version 107.
DE SubName: Full=Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:ANO90150.1};
DE EC=4.1.1.8 {ECO:0000313|EMBL:ANO90150.1};
DE SubName: Full=Putative enzyme {ECO:0000313|EMBL:ACI80566.1};
GN Name=oxc {ECO:0000313|EMBL:EFB4534281.1};
GN ORFNames=ACU57_26875 {ECO:0000313|EMBL:KPO03929.1}, AM464_03385
GN {ECO:0000313|EMBL:AWS62053.1}, BCB93_000296
GN {ECO:0000313|EMBL:EFI6950734.1}, BGM66_004282
GN {ECO:0000313|EMBL:EFH0367775.1}, BJI68_23910
GN {ECO:0000313|EMBL:OIZ59669.1}, BJJ90_07470
GN {ECO:0000313|EMBL:APT01864.1}, C0P57_003587
GN {ECO:0000313|EMBL:EFB4534281.1}, C3F40_25455
GN {ECO:0000313|EMBL:AUY04803.1}, C9E67_08225
GN {ECO:0000313|EMBL:QCL47178.1}, CIG67_09300
GN {ECO:0000313|EMBL:RVE14053.1}, CTR35_000100
GN {ECO:0000313|EMBL:EFC3523037.1}, D4M65_09280
GN {ECO:0000313|EMBL:TXW80505.1}, E6D34_00725
GN {ECO:0000313|EMBL:EFC9747828.1}, ECs3253
GN {ECO:0000313|EMBL:ACI80566.1}, EIZ93_14350
GN {ECO:0000313|EMBL:MQK25475.1}, FOI11_001075
GN {ECO:0000313|EMBL:QOY31432.1}, FOI11_18975
GN {ECO:0000313|EMBL:MBA6242033.1}, FV293_20285
GN {ECO:0000313|EMBL:TXQ31927.1}, FVB16_12110
GN {ECO:0000313|EMBL:MPU49563.1}, FWK02_04565
GN {ECO:0000313|EMBL:TXT02938.1}, G4A38_22390
GN {ECO:0000313|EMBL:NYQ41283.1}, G4A47_22090
GN {ECO:0000313|EMBL:NYP87840.1}, GAJ12_04125
GN {ECO:0000313|EMBL:EFH6164229.1}, GJ11_15740
GN {ECO:0000313|EMBL:ANO90150.1}, GNW61_11000
GN {ECO:0000313|EMBL:EFH6649268.1}, GOP25_20765
GN {ECO:0000313|EMBL:EFH5894634.1}, GP965_13115
GN {ECO:0000313|EMBL:MWT21845.1}, GQM21_07870
GN {ECO:0000313|EMBL:MWK97123.1}, GRW24_07775
GN {ECO:0000313|EMBL:MXJ08370.1}, HLZ50_14095
GN {ECO:0000313|EMBL:HAJ5151150.1}, HVW43_24455
GN {ECO:0000313|EMBL:QMO43249.1}, HVY77_07955
GN {ECO:0000313|EMBL:QMF66946.1}, HX136_07175
GN {ECO:0000313|EMBL:QLG56680.1}, I6H02_07160
GN {ECO:0000313|EMBL:QPR06163.1}, J0541_000160
GN {ECO:0000313|EMBL:HBB1571324.1}, JNP96_19650
GN {ECO:0000313|EMBL:QRZ96060.1}, KV259_000415
GN {ECO:0000313|EMBL:EHS3284345.1}, KV317_001182
GN {ECO:0000313|EMBL:EHS3595194.1}, KV371_000682
GN {ECO:0000313|EMBL:EHS3806937.1}, KV406_001375
GN {ECO:0000313|EMBL:EHS3996551.1}, KV449_001071
GN {ECO:0000313|EMBL:EHS4167030.1}, KV455_001632
GN {ECO:0000313|EMBL:EHS4133225.1}, KV463_000778
GN {ECO:0000313|EMBL:EHS4171914.1}, KV469_000815
GN {ECO:0000313|EMBL:EHS4177128.1}, KV499_000952
GN {ECO:0000313|EMBL:EHS4292544.1}, KV500_001472
GN {ECO:0000313|EMBL:EHS4313031.1}, NCTC10429_02348
GN {ECO:0000313|EMBL:STL87460.1}, NCTC11181_03734
GN {ECO:0000313|EMBL:STD45382.1}, NCTC8500_01639
GN {ECO:0000313|EMBL:STM37881.1}, NCTC9045_01788
GN {ECO:0000313|EMBL:STJ53919.1}, NCTC9073_04311
GN {ECO:0000313|EMBL:SPX16536.1}, NCTC9117_02098
GN {ECO:0000313|EMBL:STJ79512.1};
OS Escherichia coli.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=562 {ECO:0000313|EMBL:ACI80566.1};
RN [1] {ECO:0000313|EMBL:ACI80566.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=493/89 {ECO:0000313|EMBL:ACI80566.1}, 86-24
RC {ECO:0000313|EMBL:ACI80567.1}, 87-14 {ECO:0000313|EMBL:ACI80568.1},
RC TB182A {ECO:0000313|EMBL:ACI80569.1}, and TW14359
RC {ECO:0000313|EMBL:ACI80570.1};
RX PubMed=19439656; DOI=10.1073/pnas.0812949106;
RA Leopold S.R., Magrini V., Holt N.J., Shaikh N., Mardis E.R., Cagno J.,
RA Ogura Y., Iguchi A., Hayashi T., Mellmann A., Karch H., Besser T.E.,
RA Sawyer S.A., Whittam T.S., Tarr P.I.;
RT "A precise reconstruction of the emergence and constrained radiations of
RT Escherichia coli O157 portrayed by backbone concatenomic analysis.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:8713-8718(2009).
RN [2] {ECO:0000313|EMBL:KPO03929.1, ECO:0000313|Proteomes:UP000050556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AW1.3 {ECO:0000313|EMBL:KPO03929.1,
RC ECO:0000313|Proteomes:UP000050556};
RX PubMed=26441869; DOI=10.3389/fmicb.2015.00932;
RA Mercer R.G., Zheng J., Garcia-Hernandez R., Ruan L., Ganzle M.G.,
RA McMullen L.M.;
RT "Genetic determinants of heat resistance in Escherichia coli.";
RL Front. Microbiol. 6:932-932(2015).
RN [3] {ECO:0000313|EMBL:ANO90150.1, ECO:0000313|Proteomes:UP000092566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=06-00048 {ECO:0000313|EMBL:ANO90150.1,
RC ECO:0000313|Proteomes:UP000092566};
RA Timme R., Allard M.W., Strain E., Evans P.S., Lorenz S., Brown E.;
RT "Whole genome shotgun sequencing of cultured foodborne pathogen.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:APT01864.1, ECO:0000313|Proteomes:UP000185422}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SLK172 {ECO:0000313|EMBL:APT01864.1,
RC ECO:0000313|Proteomes:UP000185422};
RA Bai L., Wang J., Hurley D., Yu Z., Wang L., Chen Q., Li J., Li F.,
RA Fanning S.;
RT "Characterisation of two large plasmids containing ESBL genes; a novel
RT disrupted mcr-1 gene and a lysogenized phage P-1 like sequence, cultured
RT from a human atypical enteropathogenic Escherichia coli (aEPEC) recovered
RT in China.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:OIZ59669.1, ECO:0000313|Proteomes:UP000183429}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MN067 {ECO:0000313|EMBL:OIZ59669.1,
RC ECO:0000313|Proteomes:UP000183429};
RA Nagarjuna D., Yadav M.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:RVE14053.1, ECO:0000313|Proteomes:UP000288459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCPM 6219 {ECO:0000313|EMBL:RVE14053.1,
RC ECO:0000313|Proteomes:UP000288459};
RA Liu S.-L., Zhou Y.-J., Zhao M.-F.;
RT "Sequencing of Escherichia coli CCPM 6219.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:HAJ5151150.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ecoli[ST-219], Ecoli[ST-219] {ECO:0000313|EMBL:HAJ5151150.1},
RC and Escherichia coli {ECO:0000313|EMBL:HBB1571324.1};
RX PubMed=30286803;
RA Souvorov A., Agarwala R., Lipman D.J.;
RT "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL Genome Biol. 19:153-153(2018).
RN [8] {ECO:0000313|EMBL:AUY04803.1, ECO:0000313|Proteomes:UP000239554}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ECONIH4 {ECO:0000313|EMBL:AUY04803.1,
RC ECO:0000313|Proteomes:UP000239554};
RX PubMed=29437920;
RG NISC Comparative Sequencing Program;
RA Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
RA Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
RA Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
RT "Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
RT Bacterial Plasmids Conferring Carbapenem Resistance.";
RL MBio 9:e02011-e02017(2018).
RN [9] {ECO:0000313|EMBL:AUY04803.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ECONIH4 {ECO:0000313|EMBL:AUY04803.1};
RG NISC Comparative Sequencing Program;
RA Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
RA Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
RA Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
RT "Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
RT Bacterial Plasmids Conferring Carbapenem Resistance.";
RL MBio 9:0-0(2018).
RN [10] {ECO:0000313|EMBL:QCL47178.1, ECO:0000313|Proteomes:UP000298553}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=143 {ECO:0000313|EMBL:QCL47178.1,
RC ECO:0000313|Proteomes:UP000298553};
RA Bono J.L., Arthur T.M.;
RT "WGA of Escherichia coli O157:H7: comparison of multiple isolates.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [11] {ECO:0000313|EMBL:AWS62053.1, ECO:0000313|Proteomes:UP000247477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR_0085 {ECO:0000313|EMBL:AWS62053.1,
RC ECO:0000313|Proteomes:UP000247477};
RA Conlan S., Thomas P.J., Mullikin J., Frank K.M., Segre J.A.;
RT "Whole genome sequencing of Escherichia coli AR_0085.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
RN [12] {ECO:0000313|Proteomes:UP000250780, ECO:0000313|Proteomes:UP000254088}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC10429 {ECO:0000313|EMBL:STL87460.1,
RC ECO:0000313|Proteomes:UP000254088}, NCTC11181
RC {ECO:0000313|EMBL:STD45382.1, ECO:0000313|Proteomes:UP000254219},
RC NCTC8500 {ECO:0000313|EMBL:STM37881.1,
RC ECO:0000313|Proteomes:UP000254429}, NCTC9045
RC {ECO:0000313|EMBL:STJ53919.1, ECO:0000313|Proteomes:UP000254503},
RC NCTC9073 {ECO:0000313|EMBL:SPX16536.1,
RC ECO:0000313|Proteomes:UP000250780}, and NCTC9117
RC {ECO:0000313|EMBL:STJ79512.1, ECO:0000313|Proteomes:UP000254785};
RG Pathogen Informatics;
RA Doyle S.;
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [13] {ECO:0000313|EMBL:TXW80505.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=N023.E-21 {ECO:0000313|EMBL:TXW80505.1};
RA Gasparrini A.J.;
RT "Persistent metagenomic signatures of early life antibiotic treatment in
RT the infant gut microbiota and resistome.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
RN [14] {ECO:0000313|EMBL:MQK25475.1, ECO:0000313|Proteomes:UP000359125}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A016f {ECO:0000313|EMBL:MQK25475.1,
RC ECO:0000313|Proteomes:UP000359125};
RX PubMed=31642700; DOI=.1289/EHP5251;
RA Li J., Bi Z., Ma S., Chen B., Cai C., He J., Schwarz S., Sun C., Zhou Y.,
RA Yin J., Hulth A., Wang Y., Shen Z., Wang S., Wu C., Nilsson L.E.,
RA Walsh T.R., Borjesson S., Shen J., Sun Q., Wang Y.;
RT "Inter-host Transmission of Carbapenemase-Producing Escherichia coli among
RT Humans and Backyard Animals.";
RL Environ. Health Perspect. 127:107009-107009(2019).
RN [15] {ECO:0000313|EMBL:EFC9747828.1, ECO:0000313|Proteomes:UP000532204}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CVM N18EC122 {ECO:0000313|EMBL:EFC9747828.1,
RC ECO:0000313|Proteomes:UP000532204}, CVM N19EC0596
RC {ECO:0000313|EMBL:EFH6164229.1, ECO:0000313|Proteomes:UP000537181},
RC FSIS11705178 {ECO:0000313|EMBL:EFC3523037.1,
RC ECO:0000313|Proteomes:UP000538406}, and FSIS11706358
RC {ECO:0000313|EMBL:EFB4534281.1, ECO:0000313|Proteomes:UP000542214};
RG NARMS: The National Antimicrobial Resistance Monitoring System;
RL Submitted (MAY-2019) to the EMBL/GenBank/DDBJ databases.
RN [16] {ECO:0000313|EMBL:MPU49563.1, ECO:0000313|Proteomes:UP000392867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WU2356 {ECO:0000313|EMBL:MPU49563.1,
RC ECO:0000313|Proteomes:UP000392867};
RA Neumann N.;
RT "Identification of Water Treatment Resistant and Multidrug Resistant
RT Urinary Pathogenic Escherichia coli in Wastewater.";
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
RN [17] {ECO:0000313|Proteomes:UP000321295, ECO:0000313|Proteomes:UP000321461}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1_45_11 {ECO:0000313|EMBL:TXQ31927.1,
RC ECO:0000313|Proteomes:UP000321295}, and 3_77_5
RC {ECO:0000313|EMBL:TXT02938.1, ECO:0000313|Proteomes:UP000321461};
RA Siniagina M.N., Markelova M.I., Laikov A.V., Boulygina E.A.,
RA Khusnutdinova D.R., Kharchenko A., Grigoryeva T.V.;
RT "Whole genome analysis of cultivated E. coli strains isolated from CD
RT patients and healthy donors.";
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
RN [18] {ECO:0000313|EMBL:MWK97123.1, ECO:0000313|Proteomes:UP000462271}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10432wG8 {ECO:0000313|EMBL:MWK97123.1,
RC ECO:0000313|Proteomes:UP000462271};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_10432.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [19] {ECO:0000313|EMBL:MXJ08370.1, ECO:0000313|Proteomes:UP000447081}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10434wG3 {ECO:0000313|EMBL:MXJ08370.1,
RC ECO:0000313|Proteomes:UP000447081};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_10434.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [20] {ECO:0000313|EMBL:MWT21845.1, ECO:0000313|Proteomes:UP000462410}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8378wH8 {ECO:0000313|EMBL:MWT21845.1,
RC ECO:0000313|Proteomes:UP000462410};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_8377-8380.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [21] {ECO:0000313|EMBL:QLG56680.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=EC2 {ECO:0000313|EMBL:QLG56680.1};
RX PubMed=32739475;
RA Mowlaboccus S., Daley D., Pang S., Gottlieb T., Merlino J., Nimmo G.R.,
RA George N., Korman T.M., Streitberg R., Robson J., Peachey G., Collignon P.,
RA Bradbury S., Colombi E., Ramsay J.P., Rogers B.A., Coombs G.W.;
RT "Identification and characterisation of fosfomycin resistance in
RT Escherichia coli urinary tract infection isolates from Australia.";
RL Int. J. Antimicrob. Agents 56:0-106121(2020).
RN [22] {ECO:0000313|EMBL:NYP87840.1, ECO:0000313|Proteomes:UP000517067}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EH3306 {ECO:0000313|EMBL:NYQ41283.1}, and EH3307
RC {ECO:0000313|EMBL:NYP87840.1, ECO:0000313|Proteomes:UP000517067};
RX PubMed=32599678;
RA Habets A., Crombe F., Nakamura K., Guerin V., De Rauw K., Pierard D.,
RA Saulmont M., Hayashi T., Mainil J.G., Thiry D.;
RT "Genetic characterization of Shigatoxigenic and enteropathogenic
RT Escherichia coli O80:H2 from diarrheic and septicemic calves and
RT relatedness to human Shigatoxigenic E. coli O80:H2.";
RL J. Appl. Microbiol. 0:0-0(2020).
RN [23] {ECO:0000313|EMBL:EFH0367775.1, ECO:0000313|Proteomes:UP000521991}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PNUSAE004166 {ECO:0000313|EMBL:EFH0367775.1,
RC ECO:0000313|Proteomes:UP000521991};
RG PulseNet: The National Subtyping Network for Foodborne Disease Surveillance;
RA Tarr C.L., Trees E., Katz L.S., Carleton-Romer H.A., Stroika S.,
RA Kucerova Z., Roache K.F., Sabol A.L., Besser J., Gerner-Smidt P.;
RL Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
RN [24] {ECO:0000313|Proteomes:UP000509796}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EC2 {ECO:0000313|Proteomes:UP000509796};
RA Mowlaboccus S., Daley D., Pang S., Gottlieb T., Nimmo G.R., George N.,
RA Korman T.M., Strietberg R., Robson J., Peachey G., Collignon P.,
RA Bradbury S., Colombi E., Ramsay J.P., Rogers B.A., Coombs G.W.;
RT "Identification and Characterisation of Fosfomycin Resistance in
RT Escherichia coli Urinary Tract Infection Isolates from Australia.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [25] {ECO:0000313|Proteomes:UP000512322, ECO:0000313|Proteomes:UP000514754}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RHB10-C12 {ECO:0000313|EMBL:QMO43249.1,
RC ECO:0000313|Proteomes:UP000514754}, and RHB30-C10
RC {ECO:0000313|EMBL:QMF66946.1, ECO:0000313|Proteomes:UP000512322};
RA Shaw L.P.;
RT "REHAB project genomes.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [26] {ECO:0000313|EMBL:MBA6242033.1, ECO:0000313|Proteomes:UP000581425}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1409 {ECO:0000313|EMBL:MBA6242033.1,
RC ECO:0000313|Proteomes:UP000581425};
RA Ekesi N.S., Alrubaye A., Rhoads D.;
RT "Analysis of Genomes of Bacterial Isolates from Lameness Outbreaks in
RT Broilers.";
RL Submitted (JUL-2020) to the EMBL/GenBank/DDBJ databases.
RN [27] {ECO:0000313|EMBL:QOY31432.1, ECO:0000313|Proteomes:UP000581425}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1409 {ECO:0000313|EMBL:QOY31432.1,
RC ECO:0000313|Proteomes:UP000581425};
RA Rhoads D., Ekesi N.S.;
RT "Analysis of Genomes of Bacterial Isolates from Lameness Outbreaks in
RT Broilers.";
RL Submitted (OCT-2020) to the EMBL/GenBank/DDBJ databases.
RN [28] {ECO:0000313|EMBL:QPR06163.1, ECO:0000313|Proteomes:UP000594864}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FDAARGOS_945 {ECO:0000313|EMBL:QPR06163.1,
RC ECO:0000313|Proteomes:UP000594864};
RA Sproer C., Gronow S., Severitt S., Schroder I., Tallon L., Sadzewicz L.,
RA Zhao X., Boylan J., Ott S., Bowen H., Vavikolanu K., Mehta A.,
RA Aluvathingal J., Nadendla S., Lowell S., Myers T., Yan Y., Sichtig H.;
RT "FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
RT Supporting development and validation of Infectious Disease Dx tests.";
RL Submitted (DEC-2020) to the EMBL/GenBank/DDBJ databases.
RN [29] {ECO:0000313|EMBL:QRZ96060.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CFSAN083829 {ECO:0000313|EMBL:QRZ96060.1};
RA Hoffmann M., Balkey M., Ronco T., Hendriksen R.S.;
RT "Co-localization of colistin and carbapenem -resistance genes on a novel
RT transferable IncHI2 plasmid in Escherichia coli from chicken-origin.";
RL Submitted (FEB-2021) to the EMBL/GenBank/DDBJ databases.
RN [30] {ECO:0000313|EMBL:HBB1571324.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Ecoli[ST-219] {ECO:0000313|EMBL:HAJ5151150.1}, and Escherichia
RC coli {ECO:0000313|EMBL:HBB1571324.1};
RG NCBI Pathogen Detection Project;
RL Submitted (MAR-2021) to the EMBL/GenBank/DDBJ databases.
RN [31] {ECO:0000313|EMBL:EHS3284345.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CFSAN046653 {ECO:0000313|EMBL:EFI6950734.1}, Elk_RLE1_A7
RC {ECO:0000313|EMBL:EHS3284345.1}, Elk_RLE1_D5
RC {ECO:0000313|EMBL:EHS4167030.1}, Elk_RLE1_D7
RC {ECO:0000313|EMBL:EHS3595194.1}, Elk_RLE1_D8
RC {ECO:0000313|EMBL:EHS4292544.1}, Elk_RLE1_E7
RC {ECO:0000313|EMBL:EHS4171914.1}, Elk_RLE1_F6
RC {ECO:0000313|EMBL:EHS3996551.1}, Elk_RLE1_G8
RC {ECO:0000313|EMBL:EHS4133225.1}, Elk_RLE1_H7
RC {ECO:0000313|EMBL:EHS4177128.1}, Elk_RLE2_A10
RC {ECO:0000313|EMBL:EHS3806937.1}, Elk_RLE2_C11
RC {ECO:0000313|EMBL:EHS4313031.1}, PSU-2072
RC {ECO:0000313|EMBL:EFH6649268.1, ECO:0000313|Proteomes:UP000530628},
RC and PSU-2243 {ECO:0000313|EMBL:EFH5894634.1,
RC ECO:0000313|Proteomes:UP000531813};
RG GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback;
RL Submitted (JUL-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SIMILARITY: Belongs to the TPP enzyme family.
CC {ECO:0000256|ARBA:ARBA00007812, ECO:0000256|RuleBase:RU362132}.
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DR EMBL; EU898015; ACI80566.1; -; Genomic_DNA.
DR EMBL; EU898016; ACI80567.1; -; Genomic_DNA.
DR EMBL; EU898017; ACI80568.1; -; Genomic_DNA.
DR EMBL; EU898018; ACI80569.1; -; Genomic_DNA.
DR EMBL; EU898019; ACI80570.1; -; Genomic_DNA.
DR EMBL; CP015229; ANO90150.1; -; Genomic_DNA.
DR EMBL; CP017631; APT01864.1; -; Genomic_DNA.
DR EMBL; CP026399; AUY04803.1; -; Genomic_DNA.
DR EMBL; CP029741; AWS62053.1; -; Genomic_DNA.
DR EMBL; AASFZR010000065; EFB4534281.1; -; Genomic_DNA.
DR EMBL; AASHPR010000001; EFC3523037.1; -; Genomic_DNA.
DR EMBL; AASEBA010000001; EFC9747828.1; -; Genomic_DNA.
DR EMBL; AASURL010000099; EFH0367775.1; -; Genomic_DNA.
DR EMBL; AASWIS010000028; EFH5894634.1; -; Genomic_DNA.
DR EMBL; AASWKX010000003; EFH6164229.1; -; Genomic_DNA.
DR EMBL; AASWOY010000022; EFH6649268.1; -; Genomic_DNA.
DR EMBL; AASZRA010000001; EFI6950734.1; -; Genomic_DNA.
DR EMBL; ABBDFQ010000001; EHS3284345.1; -; Genomic_DNA.
DR EMBL; ABBDHW010000003; EHS3595194.1; -; Genomic_DNA.
DR EMBL; ABBDJP010000002; EHS3806937.1; -; Genomic_DNA.
DR EMBL; ABBDLD010000004; EHS3996551.1; -; Genomic_DNA.
DR EMBL; ABBDMN010000005; EHS4133225.1; -; Genomic_DNA.
DR EMBL; ABBDMM010000003; EHS4167030.1; -; Genomic_DNA.
DR EMBL; ABBDMP010000002; EHS4171914.1; -; Genomic_DNA.
DR EMBL; ABBDMO010000003; EHS4177128.1; -; Genomic_DNA.
DR EMBL; ABBDNM010000003; EHS4292544.1; -; Genomic_DNA.
DR EMBL; ABBDNR010000004; EHS4313031.1; -; Genomic_DNA.
DR EMBL; DABGKZ010000018; HAJ5151150.1; -; Genomic_DNA.
DR EMBL; DADUEU010000001; HBB1571324.1; -; Genomic_DNA.
DR EMBL; LDYI01000178; KPO03929.1; -; Genomic_DNA.
DR EMBL; JACGTG010000001; MBA6242033.1; -; Genomic_DNA.
DR EMBL; VOTT01000204; MPU49563.1; -; Genomic_DNA.
DR EMBL; RYCF01000044; MQK25475.1; -; Genomic_DNA.
DR EMBL; WTML01000016; MWK97123.1; -; Genomic_DNA.
DR EMBL; WTRC01000180; MWT21845.1; -; Genomic_DNA.
DR EMBL; WUIG01000086; MXJ08370.1; -; Genomic_DNA.
DR EMBL; JABUPU010000043; NYP87840.1; -; Genomic_DNA.
DR EMBL; JABUPJ010000041; NYQ41283.1; -; Genomic_DNA.
DR EMBL; MKQI01000184; OIZ59669.1; -; Genomic_DNA.
DR EMBL; CP028607; QCL47178.1; -; Genomic_DNA.
DR EMBL; CP058571; QLG56680.1; -; Genomic_DNA.
DR EMBL; CP057293; QMF66946.1; -; Genomic_DNA.
DR EMBL; CP057906; QMO43249.1; -; Genomic_DNA.
DR EMBL; CP063369; QOY31432.1; -; Genomic_DNA.
DR EMBL; CP065611; QPR06163.1; -; Genomic_DNA.
DR EMBL; CP070393; QRZ96060.1; -; Genomic_DNA.
DR EMBL; NPIM01000116; RVE14053.1; -; Genomic_DNA.
DR EMBL; UASD01000009; SPX16536.1; -; Genomic_DNA.
DR EMBL; UFYN01000002; STD45382.1; -; Genomic_DNA.
DR EMBL; UGDD01000002; STJ53919.1; -; Genomic_DNA.
DR EMBL; UGDC01000003; STJ79512.1; -; Genomic_DNA.
DR EMBL; UGEX01000001; STL87460.1; -; Genomic_DNA.
DR EMBL; UGFG01000001; STM37881.1; -; Genomic_DNA.
DR EMBL; VRXD01000032; TXQ31927.1; -; Genomic_DNA.
DR EMBL; VSBS01000090; TXT02938.1; -; Genomic_DNA.
DR EMBL; QYMS01000014; TXW80505.1; -; Genomic_DNA.
DR RefSeq; WP_001283490.1; NZ_WXYZ01000001.1.
DR PATRIC; fig|562.10472.peg.2360; -.
DR eggNOG; COG0028; Bacteria.
DR OMA; MRVISFR; -.
DR Proteomes; UP000050556; Unassembled WGS sequence.
DR Proteomes; UP000092566; Chromosome.
DR Proteomes; UP000183429; Unassembled WGS sequence.
DR Proteomes; UP000185422; Chromosome.
DR Proteomes; UP000239554; Chromosome.
DR Proteomes; UP000247477; Chromosome.
DR Proteomes; UP000250780; Unassembled WGS sequence.
DR Proteomes; UP000254088; Unassembled WGS sequence.
DR Proteomes; UP000254219; Unassembled WGS sequence.
DR Proteomes; UP000254429; Unassembled WGS sequence.
DR Proteomes; UP000254503; Unassembled WGS sequence.
DR Proteomes; UP000254785; Unassembled WGS sequence.
DR Proteomes; UP000288459; Unassembled WGS sequence.
DR Proteomes; UP000298553; Chromosome.
DR Proteomes; UP000321295; Unassembled WGS sequence.
DR Proteomes; UP000321461; Unassembled WGS sequence.
DR Proteomes; UP000359125; Unassembled WGS sequence.
DR Proteomes; UP000392867; Unassembled WGS sequence.
DR Proteomes; UP000438913; Unassembled WGS sequence.
DR Proteomes; UP000447081; Unassembled WGS sequence.
DR Proteomes; UP000462271; Unassembled WGS sequence.
DR Proteomes; UP000462410; Unassembled WGS sequence.
DR Proteomes; UP000509796; Chromosome.
DR Proteomes; UP000512322; Chromosome.
DR Proteomes; UP000514754; Chromosome.
DR Proteomes; UP000517067; Unassembled WGS sequence.
DR Proteomes; UP000521991; Unassembled WGS sequence.
DR Proteomes; UP000530628; Unassembled WGS sequence.
DR Proteomes; UP000531813; Unassembled WGS sequence.
DR Proteomes; UP000532204; Unassembled WGS sequence.
DR Proteomes; UP000537181; Unassembled WGS sequence.
DR Proteomes; UP000538406; Unassembled WGS sequence.
DR Proteomes; UP000540485; Unassembled WGS sequence.
DR Proteomes; UP000542214; Unassembled WGS sequence.
DR Proteomes; UP000581425; Chromosome.
DR Proteomes; UP000594864; Chromosome.
DR Proteomes; UP000663166; Chromosome.
DR Proteomes; UP000702781; Unassembled WGS sequence.
DR Proteomes; UP000729274; Unassembled WGS sequence.
DR Proteomes; UP000730526; Unassembled WGS sequence.
DR Proteomes; UP000739847; Unassembled WGS sequence.
DR Proteomes; UP000753065; Unassembled WGS sequence.
DR Proteomes; UP000754717; Unassembled WGS sequence.
DR Proteomes; UP000759070; Unassembled WGS sequence.
DR Proteomes; UP000775646; Unassembled WGS sequence.
DR Proteomes; UP000779652; Unassembled WGS sequence.
DR Proteomes; UP000784110; Unassembled WGS sequence.
DR Proteomes; UP000813224; Unassembled WGS sequence.
DR Proteomes; UP000840371; Unassembled WGS sequence.
DR Proteomes; UP000870292; Unassembled WGS sequence.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0008949; F:oxalyl-CoA decarboxylase activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0033611; P:oxalate catabolic process; IEA:InterPro.
DR CDD; cd02004; TPP_BZL_OCoD_HPCL; 1.
DR CDD; cd07035; TPP_PYR_POX_like; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR Gene3D; 3.40.50.1220; TPP-binding domain; 1.
DR InterPro; IPR029035; DHS-like_NAD/FAD-binding_dom.
DR InterPro; IPR045025; HACL1-like.
DR InterPro; IPR017660; Oxalyl-CoA_decarboxylase.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR012000; Thiamin_PyroP_enz_cen_dom.
DR InterPro; IPR012001; Thiamin_PyroP_enz_TPP-bd_dom.
DR InterPro; IPR011766; TPP_enzyme_TPP-bd.
DR NCBIfam; TIGR03254; oxalate_oxc; 1.
DR PANTHER; PTHR43710; 2-HYDROXYACYL-COA LYASE; 1.
DR PANTHER; PTHR43710:SF2; 2-HYDROXYACYL-COA LYASE 1; 1.
DR Pfam; PF02775; TPP_enzyme_C; 1.
DR Pfam; PF00205; TPP_enzyme_M; 1.
DR Pfam; PF02776; TPP_enzyme_N; 1.
DR SUPFAM; SSF52467; DHS-like NAD/FAD-binding domain; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 3: Inferred from homology;
KW Lyase {ECO:0000313|EMBL:ANO90150.1};
KW Thiamine pyrophosphate {ECO:0000256|RuleBase:RU362132}.
FT DOMAIN 9..125
FT /note="Thiamine pyrophosphate enzyme N-terminal TPP-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF02776"
FT DOMAIN 202..327
FT /note="Thiamine pyrophosphate enzyme central"
FT /evidence="ECO:0000259|Pfam:PF00205"
FT DOMAIN 403..540
FT /note="Thiamine pyrophosphate enzyme TPP-binding"
FT /evidence="ECO:0000259|Pfam:PF02775"
SQ SEQUENCE 564 AA; 60581 MW; 94418B2BE7D40C17 CRC64;
MSDQLQMTDG MHIIVEALKQ NNIDTIYGVV GIPVTDMARH AQAEGIRYIG FRHEQSAGYA
AAASGFLTQK PGICLTVSAP GFLNGLTALA NATVNGFPMI MISGSSDRAI VDLQQGDYEE
LDQMNAAKPY AKAAFRVNQP QDLGIALARA IRVSVSGRPG GVYLDLPANV LAATMEKDEA
LTTIVKVENP SPALLPCPKS VTSAISLLAK AERPLIILGK GAAYSQADEQ LREFIESAQI
PFLPMSMAKG ILEDTHPLSA AAARSFALAN ADVVMLVGAR LNWLLAHGKK GWAADTQFIQ
LDIEPQEIDS NRPIAVPVVG DIASSMQGML AELKQNTFTT PLVWRDILNI HKQQNAQKMH
EKLSTDTQPL NYFNALSAVR DVLRENQDIY LVNEGANTLD NARNIIDMYK PRRRLDCGTW
GVMGIGMGYA IGASVTSGSP VVAIEGDSAF GFSGMEIETI CRYNLPVTIV IFNNGGIYRG
DGVDLSGAGA PSPTDLLHHA RYDKLMDAFR GVGYNVTTTD ELRHALTTGI QSRKPTIINV
VIDPAAGTES GHITKLNPKQ VAGN
//
