ID C3XR80_BRAFL Unreviewed; 464 AA.
AC C3XR80;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=RUN domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRAFLDRAFT_120280 {ECO:0000313|EMBL:EEN69198.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN69198.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN69198.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN69198.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666456; EEN69198.1; -; Genomic_DNA.
DR RefSeq; XP_002613189.1; XM_002613143.1.
DR AlphaFoldDB; C3XR80; -.
DR eggNOG; KOG1729; Eukaryota.
DR InParanoid; C3XR80; -.
DR CDD; cd13168; PTB_LOC417372; 1.
DR CDD; cd17682; RUN_RUFY4_like; 1.
DR Gene3D; 1.20.58.900; -; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR006020; PTB/PI_dom.
DR InterPro; IPR004012; Run_dom.
DR InterPro; IPR037213; Run_dom_sf.
DR PANTHER; PTHR46753; FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR46753:SF3; RUN DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00640; PID; 1.
DR Pfam; PF02759; RUN; 1.
DR SMART; SM00593; RUN; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF140741; RUN domain-like; 1.
DR PROSITE; PS50106; PDZ; 1.
DR PROSITE; PS01179; PID; 1.
DR PROSITE; PS50826; RUN; 1.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 40..181
FT /note="RUN"
FT /evidence="ECO:0000259|PROSITE:PS50826"
FT DOMAIN 189..260
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 335..457
FT /note="PID"
FT /evidence="ECO:0000259|PROSITE:PS01179"
SQ SEQUENCE 464 AA; 52669 MW; DFCFA467AE5FA161 CRC64;
MQNGSKTSNR SWNKMAISDP LLRELQTILK KLKEEPKPIT DYCVLLKPLC ETLERILRKG
LKQPGSLFGI NKRDYWSWME STPNYVCNDK YNPFLNRAID LTKSSPKLRT LQGRGRCFIR
LALAKKIVSV PVEHLLRNAR LTEYWYDSGL SIIANPPLGE ALMALLFALT DINFELDIKN
ASFLDESWVI PVYKRLELVP CTSLGMTIRY LDNRIFVVKV EENGVAGEDN KIEPGDIVDE
LYQESLYGCK QGKVNSLLRE HQGWPVYVSV IKCRLPDGTI YPPLVSRIKK LKEELKEFEV
KKLNKKGPAP MPAHALLPQD YPEQAPVHDP EGKAEFNAKY VGQVSTGRYG DVAEIEGAVE
KAIEQNKQQQ ITENKEVHVE LTETEVIITD LKTNKELSKH SYTEISSCGR RSDMTKYFAF
IAGDTQCSVS RNFTAFVFEA ESADESKIIL CSIAQGFGRT SWFV
//
