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Database: UniProt
Entry: C3YF88_BRAFL
LinkDB: C3YF88_BRAFL
Original site: C3YF88_BRAFL 
ID   C3YF88_BRAFL            Unreviewed;      1479 AA.
AC   C3YF88;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   30-AUG-2017, entry version 39.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEN61090.1};
GN   ORFNames=BRAFLDRAFT_124141 {ECO:0000313|EMBL:EEN61090.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
OX   NCBI_TaxID=7739 {ECO:0000313|Proteomes:UP000001554};
RN   [1] {ECO:0000313|EMBL:EEN61090.1, ECO:0000313|Proteomes:UP000001554}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN61090.1,
RC   ECO:0000313|Proteomes:UP000001554};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN61090.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J.,
RA   Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J.,
RA   Jurka J., Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E.,
RA   Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y.,
RA   Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A.,
RA   Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666508; EEN61090.1; -; Genomic_DNA.
DR   RefSeq; XP_002605080.1; XM_002605034.1.
DR   STRING; 7739.JGI124141; -.
DR   GeneID; 7240902; -.
DR   KEGG; bfo:BRAFLDRAFT_124141; -.
DR   eggNOG; KOG3614; Eukaryota.
DR   eggNOG; ENOG410XR5B; LUCA.
DR   InParanoid; C3YF88; -.
DR   Proteomes; UP000001554; Partially assembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   Pfam; PF00520; Ion_trans; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001554};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001554};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    957    976       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1066   1089       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1095   1111       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1132   1152       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1197   1219       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      961   1233       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   COILED     1343   1366       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1479 AA;  163593 MW;  4643434FA3702C55 CRC64;
     MGKGVKSAVS DCPSMSKGVK SAVSDCPSMG KGVKSAVSDC PSMGKGVKSA ISDCCSMGKG
     VKSAVSDCCS MGKGVKSAVS DCPSMVCMSK GVKSAVSDCP SMSKGVKSAV SDCPSMSKGV
     KSAISDCPSM SKGVKSAISD CPSMSKGVKS AISDCPSMRK WGITPIERQE SGDQSRSRDH
     SGHARRQDVE MTVVGGDPSA PERRDRGHRS SKRRKKKKKQ KENNGEVNPA FSNSDAGDNR
     NSDDVETIQN YNRTPQTLPP ITGAQHTHGG ASPRQPSPRR RDAQEDVIVP IDVEPLQGKC
     DVVDVGGGRN FLGSLHSMLG FGGGEERQAA THLDKAARRP TMDGRMSWRG GWGRADGVEA
     VVIENNGREP QLISMVRTAS VRRVMFAERR LKYKGLGDVV VEELMLKDIE GQLQRTFGRS
     FLDRLTQGWF GKGNGEPPRH VYTADPENGL YCQWMRIANA CSTKNKLSRF VREHKDQGLH
     ESSFGEIEFL GLGGYTQRSP YIRVSLNVRP EALWELMTKH WQLEPPNLLI SVTGGAKKFL
     LKERLKNIFK IGLVKASQST GAWIITGGMN EGVMKYVGEA IRDGVNSIAG GEQRKMYAIG
     IATWGTVDNR ESLKGEADSG LFPAMYHAEA LKHGQNMAPL DLNHTHFILV DDGTTGKFSG
     ADITVRTRLE EYIMEQMTGE GLKDLKIPVV LLVVEGGPGT LKNTKEAVEK KIPAVIIDGS
     GRAADVIAYG FKRTRKKDNK PLTMEEVGKK LMSTFELEYK PNGDPPQKAY DLLDQLNYIL
     QDPTLVMTGS TDVEASAELV MTGSTDVEAS AELVMTGSTD VEASAELVRG LVEQQKLGVW
     NPCCSRDQLE EDRVDLLRLV GKVICTKLLL ILSTFLPFMI FTIKFVDQEE DQVQGEASSP
     SPAVSPRKTP RFKPQRYVHS RSRCFFSLFV EKRAQRAKRL LSVSWQLGSK GIGPLQAIYN
     FHAFYVAFLV IFSLFILTDL HPIEEKSIGI LEWLTIAWLA SLLVEEGRQV RNYRCCGYLR
     LPGGQAGEKL QVLVLWLIPG YLAGRQIFAE HPRSLRHKLE IWFSDFWNMM DCGLLLMFLL
     SLVLHVTVAA EGFEVVRVMY CITLGFSFVR LPQLFMVHKD IGPKVIMIQK MLVDLVFFLV
     ILLVFIFAYG VMRHTLIYPN SQTEWSLLLN VSLIPYWQVY GELFVDEVEG TTPSGNWLVY
     VLQGLYMLLT NVLLLNLLIA MFSFTFQKIQ DNSEQVWRFH RYDLIYEFFD RPWGAPPVII
     LGHVYRFCRW VARRCAGKPL DTSDDFSLAA GKPLDTSDDF NRAFPPDEVS RQQALEKAGA
     ENYLLRNLQL QNEHIDTKFQ TTSERLEKVL DDLEDIKESV QAKEELEASY VFPPADVTDS
     GQRARPSSAT ASTSGVAVDL QHRMSNLEDQ LGSIKDLLEH LQPKQAPGGA AEDRPAVARR
     PKSLARLAGA AAPRLGSDTP LRLQLKDPAM GHLADGAIA
//
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