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Database: UniProt
Entry: C3YJL1_BRAFL
LinkDB: C3YJL1_BRAFL
Original site: C3YJL1_BRAFL 
ID   C3YJL1_BRAFL            Unreviewed;       987 AA.
AC   C3YJL1;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   27-SEP-2017, entry version 39.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEN59318.1};
DE   Flags: Fragment;
GN   ORFNames=BRAFLDRAFT_163866 {ECO:0000313|EMBL:EEN59318.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
OX   NCBI_TaxID=7739 {ECO:0000313|Proteomes:UP000001554};
RN   [1] {ECO:0000313|EMBL:EEN59318.1, ECO:0000313|Proteomes:UP000001554}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN59318.1,
RC   ECO:0000313|Proteomes:UP000001554};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN59318.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J.,
RA   Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J.,
RA   Jurka J., Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E.,
RA   Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y.,
RA   Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A.,
RA   Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666520; EEN59318.1; -; Genomic_DNA.
DR   RefSeq; XP_002603307.1; XM_002603261.1.
DR   STRING; 7739.JGI163866; -.
DR   GeneID; 7224861; -.
DR   KEGG; bfo:BRAFLDRAFT_163866; -.
DR   eggNOG; KOG2011; Eukaryota.
DR   eggNOG; COG5537; LUCA.
DR   InParanoid; C3YJL1; -.
DR   KO; K06671; -.
DR   OMA; ICDLLII; -.
DR   Proteomes; UP000001554; Partially assembled WGS sequence.
DR   Gene3D; 1.25.10.10; -; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR020839; SCD.
DR   InterPro; IPR013721; STAG.
DR   Pfam; PF08514; STAG; 1.
DR   SUPFAM; SSF48371; SSF48371; 2.
DR   PROSITE; PS51425; SCD; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001554};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001554}.
FT   DOMAIN      234    319       SCD. {ECO:0000259|PROSITE:PS51425}.
FT   COILED      198    225       {ECO:0000256|SAM:Coils}.
FT   NON_TER       1      1       {ECO:0000313|EMBL:EEN59318.1}.
FT   NON_TER     987    987       {ECO:0000313|EMBL:EEN59318.1}.
SQ   SEQUENCE   987 AA;  113444 MW;  73709749D1AB2066 CRC64;
     GGKKGAGGRT PKPNGTATEE QAVTLFEVVK LGKSAMQSVV DEWIDSYKQD RDMALLDLIQ
     FFIQCSGCKG VVTAEMLHNM EHSDIIRKMT EEFDEDSGDY PLIMTGPQYK RFKNNFCEFI
     AVLVRQCQYS IIYDQYMMDN VISLLTGLSH SQVRAFRHTS TLAAMKLMTA LVNVALTLSV
     NLDNTQRQYE SERQKAQGKR ASERLEILMQ KRADLQENQE EVEHMMNSIF KGVFVHRYRD
     SLPEIRAICM EEIGTWMRQY SDTFLADSYL KYVGWTLHDK VGEVRKMCIS TLQALYCNKE
     NAQKLELFTN RFKDRIVSMT LDKDMDVSVQ AIKLVTMIMN DDILTSEDCE NVYQLVYSSH
     RAVAQAAGEF LNKRLFQQDD SGKQLKTKRG KKRSPNTPLV RDLVQFFIES ELHEHAAYLV
     DSLWETNEML KDWECMTDLL LEEPGRGEEV LTDQQETALV EIMTCCIRQA SEGIPPIGRA
     SAKKVQTARE KKQIYDDKVK LTEHLIQTLP ALLGKYAVDA EKVINLLCIP QYFDLDIYTT
     SRLEKHLDLL LKHMQDIVEK HAEQEVLEEC SKSLMVLCSE DYPIHTKAMV SRGGLFDALV
     QKFKQSLETF FQEGDEADED DIFSVTSAQK RLMEFYKCHD LSPFDLFEKF IFIIKAANDK
     NYIPQEILIR SIACAHMDVM WRFSRLDEHD PDKNDIRTIN SCVKTFLEYC SQLVEGYVDP
     TIQEEAFMSI VDILVVFARQ VAANPVMKNL IHHTDPVTEV RLTSLLGERV FVGPEEEHQA
     TDDEEDEANK IEALHKRRNL LAGYCKLVVY NMVSIKTAAD IFKHYMRYYN DYGDIIKTTL
     SKAREMDKVN TARTLNLALT QLFREVKGTQ QPLDRTSQPF LSIKELARRF SLTFGLDPVK
     TRQAVAEIHK SGIVFAITPL DDPDDPEGPP PFLSFLEILA EFSPKVMKQD RKTILNYLES
     KLRPGMINKI DDPWLPLLTY RNSLLEG
//
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