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Database: UniProt
Entry: C3YM89_BRAFL
LinkDB: C3YM89_BRAFL
Original site: C3YM89_BRAFL 
ID   C3YM89_BRAFL            Unreviewed;       498 AA.
AC   C3YM89;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   RecName: Full=PiggyBac transposable element-derived protein domain-containing protein {ECO:0000259|Pfam:PF13843};
GN   ORFNames=BRAFLDRAFT_72960 {ECO:0000313|EMBL:EEN58683.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN58683.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN58683.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN58683.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666529; EEN58683.1; -; Genomic_DNA.
DR   RefSeq; XP_002602671.1; XM_002602625.1.
DR   AlphaFoldDB; C3YM89; -.
DR   STRING; 7739.C3YM89; -.
DR   eggNOG; KOG3544; Eukaryota.
DR   InParanoid; C3YM89; -.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008160; Collagen.
DR   InterPro; IPR029526; PGBD.
DR   PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR   PANTHER; PTHR24023:SF604; COLLAGEN ALPHA-1(III) CHAIN; 1.
DR   Pfam; PF01391; Collagen; 1.
DR   Pfam; PF13843; DDE_Tnp_1_7; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        209..233
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          3..47
FT                   /note="PiggyBac transposable element-derived protein"
FT                   /evidence="ECO:0000259|Pfam:PF13843"
FT   REGION          283..471
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   498 AA;  52203 MW;  62EB689E66718129 CRC64;
     MNMYNLRYKA VDTADQLRAG YEFGRPSKKW HRQIFWYAMD KAVVNAFLNW KTYTAVRQDL
     PAHRVAQLSF RRALVRQLIG NFSARHRTPT ASVALPGVIG NHRQISQGKP TKACRYCAKA
     GRHMPRAKRC RPFETVYKCE MCNVSVCHVS LRPECWRATP LQQDHQTDWK SLADAAANIP
     NSLYVTRGDY AYRTDANKKT KCIHLCKKLL KATGLFFTVV NAIMVPLLAV RLITLSGEFN
     EHTGKMELQI TELKRKVGVP GPAGLTGKRG PIGPVGPVGI AGRPGSVGPP GAPGMKGPIG
     PAGPMGKAGS PGLTGSVGLP GSPGSPGRKG PVGQIGPMGK VGTPGSVGPP GASGKEGLKG
     PEGQMGMTGP PGPPGLPGSL GRKGPVGPIG PHGVPGKRGP KGSAGPRGMA GRPGYPGSAG
     PPGAPGAKGE KGLRGPIGPM GRTGKPGSVR GGKRNTGPTK QTGTQGRKWV HVKGIKKPIV
     MIPHNAPSFH IGQDGKSK
//
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