ID C3YNV8_BRAFL Unreviewed; 560 AA.
AC C3YNV8;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=Leucine-rich repeat-containing protein 24-like {ECO:0000313|RefSeq:XP_035666411.1, ECO:0000313|RefSeq:XP_035666412.1};
GN Name=LOC118409478 {ECO:0000313|RefSeq:XP_035666411.1,
GN ECO:0000313|RefSeq:XP_035666412.1, ECO:0000313|RefSeq:XP_035666414.1};
GN ORFNames=BRAFLDRAFT_94442 {ECO:0000313|EMBL:EEN58068.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN58068.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN58068.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN58068.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
RN [2] {ECO:0000313|RefSeq:XP_035666411.1, ECO:0000313|RefSeq:XP_035666412.1}
RP IDENTIFICATION.
RC STRAIN=S238N-H82 {ECO:0000313|RefSeq:XP_035666411.1,
RC ECO:0000313|RefSeq:XP_035666412.1};
RC TISSUE=Testes {ECO:0000313|RefSeq:XP_035666411.1,
RC ECO:0000313|RefSeq:XP_035666412.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; GG666535; EEN58068.1; -; Genomic_DNA.
DR RefSeq; XP_002602056.1; XM_002602010.1.
DR RefSeq; XP_035666411.1; XM_035810518.1.
DR RefSeq; XP_035666412.1; XM_035810519.1.
DR RefSeq; XP_035666414.1; XM_035810521.1.
DR KEGG; bfo:118409478; -.
DR eggNOG; KOG0619; Eukaryota.
DR InParanoid; C3YNV8; -.
DR OMA; KCAIVIS; -.
DR OrthoDB; 5359043at2759; -.
DR Proteomes; UP000001554; Chromosome 2.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR PANTHER; PTHR45842:SF12; KEKKON 5, ISOFORM A; 1.
DR PANTHER; PTHR45842; SYNAPTIC ADHESION-LIKE MOLECULE SALM; 1.
DR Pfam; PF13927; Ig_3; 1.
DR Pfam; PF13855; LRR_8; 1.
DR SMART; SM00409; IG; 1.
DR SMART; SM00408; IGc2; 1.
DR SMART; SM00369; LRR_TYP; 4.
DR SMART; SM00082; LRRCT; 1.
DR SMART; SM00013; LRRNT; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS51450; LRR; 2.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001554};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 452..475
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 261..355
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT REGION 365..421
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 365..402
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 560 AA; 60583 MW; 6B20FC81A300A942 CRC64;
MDRSSKGKPA CVRRAHTTTL LRNSEWDLAM LPWIYLVVAA GFVVLAGGTS ACPLECECNG
PTVACSNSSL STIPRGIPTN VTTLDLSNSR IALSGGIFSN FTNLLELNLG WNTISTIEQG
SFQGLTNLRT LLLRGNMLRT LPQGVFADLR SLQVLDLSQN NIRDTPSGQF PQLGELTSLN
LTGNRLQTLP ADILQLFPNL TLLSLSDNPW SCDCNSRWLI TWINQRNSSA QFDSPSCGEP
AGLHGTLLSS LETHNLTCNP PTIHNTSDLH VNTSVYSTVD LQCQARGLPQ PTLYWRLPDG
RTVPIPHAWT DGDTQFNFSG DGTLRIVNVT ASSAGRYVCG ANNSVGSDEV TYRVNVIVPT
TTASMPTVAP TNSTPVPQNT TTQQPATTPK QTTRKVTTPA PTTRRTQPPP TTATPAVTTT
TRTTTTRIIP TTTTKRDPLA DIPWDQFRRD QLGAGLGIPL ILLAIGGGVA AWYFMKRKRR
KDAARKAEAQ DGGYIVANPM ALQMDKVEPN GNAANGNNVN VPEIPVDATV IENPSIIETP
NGTLVFIPED NKSYRESKLI
//
