ID C3YRY2_BRAFL Unreviewed; 527 AA.
AC C3YRY2;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEN56887.1};
GN ORFNames=BRAFLDRAFT_75840 {ECO:0000313|EMBL:EEN56887.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN56887.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN56887.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN56887.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; GG666548; EEN56887.1; -; Genomic_DNA.
DR RefSeq; XP_002600875.1; XM_002600829.1.
DR AlphaFoldDB; C3YRY2; -.
DR eggNOG; KOG0123; Eukaryota.
DR eggNOG; KOG2177; Eukaryota.
DR InParanoid; C3YRY2; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006513; P:protein monoubiquitination; IBA:GO_Central.
DR Gene3D; 4.10.830.40; -; 1.
DR Gene3D; 1.10.1900.10; c-terminal domain of poly(a) binding protein; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR036053; PABP-dom.
DR InterPro; IPR002004; PABP_HYD.
DR InterPro; IPR047153; TRIM45/56/19.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR000315; Znf_B-box.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR25462; BONUS, ISOFORM C-RELATED; 1.
DR PANTHER; PTHR25462:SF229; NHL (RING FINGER B-BOX COILED COIL) DOMAIN CONTAINING; 1.
DR Pfam; PF00658; PABP; 1.
DR Pfam; PF00643; zf-B_box; 2.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00336; BBOX; 2.
DR SMART; SM00517; PolyA; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR SUPFAM; SSF63570; PABC (PABP) domain; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51309; PABC; 1.
DR PROSITE; PS50119; ZF_BBOX; 2.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00024}.
FT DOMAIN 17..59
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 95..142
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 157..200
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 439..516
FT /note="PABC"
FT /evidence="ECO:0000259|PROSITE:PS51309"
SQ SEQUENCE 527 AA; 59026 MW; C4A5DBC25B8E1496 CRC64;
MATAAFPEKV SDDSTQCTIC FYTFKNPKVL PCLHTFCEHC LREWVQKNDG DTIPCPICRQ
PVSLPQNGVE GLKDNFFIAS LVKAVTEHNK VRHGKDELLC TSCEEGKPAT SRCSECAEFL
CESCESAHRL VRATRGHTLF TFEELKTGKY DNVVRARKAP PCSKHPGEIL KLYCRTCETP
ICNECALFEH RDSQHDYTRI EEVAAEKRDT ILDLTPQCQA RMQFFRQTEE AQKRLREQLQ
LNVEGARQNV HRTVQTLTAL VKEEGERLLT CIHTEESSRK KQIEAEIEGA QISLASAKST
CEFAKTLARE GGDYEVASFS QDMAARLNEL TKPPMEKVNF KLANITIDYS VMVQKLTKNR
PKTAHYSLPK STERELCSLL KRARQSGVSS STGPPLGRYG DRVLVNGGGL RPGYRYTANM
RNPPSGDRPL HQAVYIQGEE PLTASMLAAA PPQEQKQMLG ERLFPLIQNS HPDLAGKITG
MLLELENPEL LHMLESREAL KAKVEEAVAV LQAHEAKERA ARAGLAE
//
