ID C3YS12_BRAFL Unreviewed; 708 AA.
AC C3YS12;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 08-NOV-2023, entry version 54.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=BRAFLDRAFT_75814 {ECO:0000313|EMBL:EEN56917.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN56917.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN56917.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN56917.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666548; EEN56917.1; -; Genomic_DNA.
DR RefSeq; XP_002600905.1; XM_002600859.1.
DR AlphaFoldDB; C3YS12; -.
DR InParanoid; C3YS12; -.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IBA:GO_Central.
DR GO; GO:1990404; F:NAD+-protein ADP-ribosyltransferase activity; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003714; F:transcription corepressor activity; IBA:GO_Central.
DR GO; GO:0010629; P:negative regulation of gene expression; IBA:GO_Central.
DR CDD; cd12301; RRM1_2_PAR10_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR14453; PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN; 1.
DR PANTHER; PTHR14453:SF67; POLY [ADP-RIBOSE] POLYMERASE; 1.
DR SMART; SM00360; RRM; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 6..82
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 84..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 195..580
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 637..708
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..125
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 136..157
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..262
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..284
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 301..355
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 363..391
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..427
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 444..458
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 459..524
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 537..560
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 563..578
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 642..708
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 708 AA; 74877 MW; 933D27B64F1F0F94 CRC64;
MSARARSVYV RGLPELSGLQ DKVSGYFQSG SLSAGGAVTR VKLLGPGQAL VTFVDETVAQ
NVLTQPQHTL HGTRIKVTAC PSHLDVPEES AEDTKETEKA AADNRQKEKE ADAVLSEEER
KVGQAEVEAA VSQQEGIKDS PATTNIPRDQ SPDSDYTTPP ESPTPKRLPV HVCHDSKIDE
SEPVIVNSLL LQKQANAGSS DSGATSQHVP QLMAESCPFE SLTGTGQPED VSPRTTGPST
PPEILFKKPK PPVPPKPSPK PTTSSTAPKE TTATSLQHAN TEGESIGDKQ QEHHPKPTPI
PAVTTETTVT AASSQHQDMC TASINQPQQP FLKPATSSSA PTETSSDSHQ HSDLLIGSRG
EQPHASPANS SSVPCGTTST SSQQPNVPNA PREDHPQQPH PSPTTTSSVP CGPASASSQQ
PNVPNALRGD LPQQPHPNPS NTSLVPRTAP PSPQHPNQPI TRDQPQHLHQ VPQSTSSVTT
ETTAISSQPS SIPNAPLEGQ LQQPYSNPTS SVPTETTSPF PQQPNLLDAP REDLPQQPHP
VTSSSAPGTA SPSPLYPNLP NTSMGGHPPP PPQRQQFYHW PHPPHMGMMY PRPPLYPPQI
PGSQAHFMPP GVGMPYGEPR HGFPWAGRGG IPPAGVQFQG QGHPASGPQS SFFPQASHPT
TGGPYMSSGQ PASSIPLTAA RSSPSCKQCP SEVPTHSKQH TDKCTTLL
//
