GenomeNet

Database: UniProt
Entry: C3YVY1_BRAFL
LinkDB: C3YVY1_BRAFL
Original site: C3YVY1_BRAFL 
ID   C3YVY1_BRAFL            Unreviewed;       130 AA.
AC   C3YVY1;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 58.
DE   RecName: Full=Ribosomal RNA methyltransferase SPB1-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF07780};
GN   ORFNames=BRAFLDRAFT_121764 {ECO:0000313|EMBL:EEN55545.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN55545.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN55545.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN55545.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666558; EEN55545.1; -; Genomic_DNA.
DR   RefSeq; XP_002599533.1; XM_002599487.1.
DR   AlphaFoldDB; C3YVY1; -.
DR   STRING; 7739.C3YVY1; -.
DR   eggNOG; KOG1098; Eukaryota.
DR   InParanoid; C3YVY1; -.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   InterPro; IPR012920; rRNA_MeTfrase_SPB1-like_C.
DR   Pfam; PF07780; Spb1_C; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils}.
FT   DOMAIN          1..119
FT                   /note="Ribosomal RNA methyltransferase SPB1-like C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF07780"
FT   REGION          85..130
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          18..48
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        103..118
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   130 AA;  14928 MW;  5CB65DB310758934 CRC64;
     MVAEYREKLK AINARPVKKV AEAKARKKRK TLKRLEKAKK RAEAITESGD MSDKEKVQQI
     KQLYKKAGAL GKKKPEKTYV VARKFNAAKR PKRPAGLKGP YRVVDPRMKK DARKNNLKSK
     QSGNKRGRRK
//
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