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Database: UniProt
Entry: C3ZDW5_BRAFL
LinkDB: C3ZDW5_BRAFL
Original site: C3ZDW5_BRAFL 
ID   C3ZDW5_BRAFL            Unreviewed;       412 AA.
AC   C3ZDW5;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 54.
DE   RecName: Full=TNF family profile domain-containing protein {ECO:0000259|PROSITE:PS50049};
GN   ORFNames=BRAFLDRAFT_65495 {ECO:0000313|EMBL:EEN48921.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN48921.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN48921.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN48921.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|ARBA:ARBA00004613}.
CC   -!- SIMILARITY: Belongs to the tumor necrosis factor family.
CC       {ECO:0000256|ARBA:ARBA00008670}.
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DR   EMBL; GG666612; EEN48921.1; -; Genomic_DNA.
DR   RefSeq; XP_002592910.1; XM_002592864.1.
DR   AlphaFoldDB; C3ZDW5; -.
DR   STRING; 7739.C3ZDW5; -.
DR   InParanoid; C3ZDW5; -.
DR   GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0048018; F:receptor ligand activity; IBA:GO_Central.
DR   GO; GO:0005164; F:tumor necrosis factor receptor binding; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   Gene3D; 2.60.120.40; -; 2.
DR   InterPro; IPR006052; TNF_dom.
DR   InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR   PANTHER; PTHR15151:SF25; EGF-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR15151; PROTEIN EIGER; 1.
DR   Pfam; PF00229; TNF; 1.
DR   SUPFAM; SSF49842; TNF-like; 2.
DR   PROSITE; PS50049; TNF_2; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        42..66
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          239..410
FT                   /note="TNF family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50049"
SQ   SEQUENCE   412 AA;  45655 MW;  745975C080348ACD CRC64;
     MTVAQVVVAR KPERCSGQSD TSVGMADSHS SPCHCAHAAQ KLAVFAASIA IFSLLWVACA
     TVYVVYVQHE FDRQLAEVRL GCTPPDTPPV PTGPLPDVAA SWDVERGNRE VEGFVFEVMA
     TDSEEHTDYQ DAEEEDENEM VQSLVRRSAE GAEAPTEVSG KKKKQRRCKM GCAGTLQASQ
     VHLAQREIQE KLEGVAEGAY KVHLAYPVPP AYLEKLAQLD QWDRRGQKER SDHQTSSSVI
     HVQGAVDSAI SAGATGKMQY WQQAVNTGGY TLHDNGEIEV HEDGYYFIYS QVMYYDPSLM
     MGHKVMVGAD EFLRCSESTV APDNRYNTCY MGAVLYYDAS AFMGHYVMVN GMSFLRCTAT
     TVSPELKYNT GYAAAARRLQ AGDRVYVKIA YPNRIIDMHA DSTYFGMFKF SD
//
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