ID C4FBU3_9ACTN Unreviewed; 443 AA.
AC C4FBU3;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 13-SEP-2023, entry version 55.
DE SubName: Full=Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EEP43642.1};
DE EC=2.4.2.2 {ECO:0000313|EMBL:EEP43642.1};
GN Name=pdp {ECO:0000313|EMBL:EEP43642.1};
GN ORFNames=COLINT_03556 {ECO:0000313|EMBL:EEP43642.1};
OS Collinsella intestinalis DSM 13280.
OC Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales;
OC Coriobacteriaceae; Collinsella.
OX NCBI_TaxID=521003 {ECO:0000313|EMBL:EEP43642.1, ECO:0000313|Proteomes:UP000003295};
RN [1] {ECO:0000313|EMBL:EEP43642.1, ECO:0000313|Proteomes:UP000003295}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 13280 {ECO:0000313|EMBL:EEP43642.1,
RC ECO:0000313|Proteomes:UP000003295};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- SIMILARITY: Belongs to the thymidine/pyrimidine-nucleoside
CC phosphorylase family. {ECO:0000256|ARBA:ARBA00006915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEP43642.1}.
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DR EMBL; ABXH02000041; EEP43642.1; -; Genomic_DNA.
DR RefSeq; WP_006723760.1; NZ_GG692711.1.
DR AlphaFoldDB; C4FBU3; -.
DR STRING; 521003.COLINT_03556; -.
DR eggNOG; COG0213; Bacteria.
DR HOGENOM; CLU_025040_0_1_11; -.
DR Proteomes; UP000003295; Unassembled WGS sequence.
DR GO; GO:0004645; F:1,4-alpha-oligoglucan phosphorylase activity; IEA:InterPro.
DR GO; GO:0016154; F:pyrimidine-nucleoside phosphorylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006206; P:pyrimidine nucleobase metabolic process; IEA:InterPro.
DR GO; GO:0006213; P:pyrimidine nucleoside metabolic process; IEA:InterPro.
DR Gene3D; 3.40.1030.10; Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain; 1.
DR Gene3D; 3.90.1170.30; Pyrimidine nucleoside phosphorylase-like, C-terminal domain; 1.
DR InterPro; IPR000312; Glycosyl_Trfase_fam3.
DR InterPro; IPR017459; Glycosyl_Trfase_fam3_N_dom.
DR InterPro; IPR036320; Glycosyl_Trfase_fam3_N_dom_sf.
DR InterPro; IPR035902; Nuc_phospho_transferase.
DR InterPro; IPR036566; PYNP-like_C_sf.
DR InterPro; IPR013102; PYNP_C.
DR InterPro; IPR018090; Pyrmidine_PPas_bac/euk.
DR InterPro; IPR000053; Thymidine/pyrmidine_PPase.
DR NCBIfam; TIGR02644; Y_phosphoryl; 1.
DR PANTHER; PTHR10515; THYMIDINE PHOSPHORYLASE; 1.
DR PANTHER; PTHR10515:SF0; THYMIDINE PHOSPHORYLASE; 1.
DR Pfam; PF02885; Glycos_trans_3N; 1.
DR Pfam; PF00591; Glycos_transf_3; 1.
DR Pfam; PF07831; PYNP_C; 1.
DR PIRSF; PIRSF000478; TP_PyNP; 1.
DR SMART; SM00941; PYNP_C; 1.
DR SUPFAM; SSF52418; Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain; 1.
DR SUPFAM; SSF47648; Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain; 1.
DR SUPFAM; SSF54680; Pyrimidine nucleoside phosphorylase C-terminal domain; 1.
PE 3: Inferred from homology;
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676,
KW ECO:0000313|EMBL:EEP43642.1};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:EEP43642.1}.
FT DOMAIN 347..421
FT /note="Pyrimidine nucleoside phosphorylase C-terminal"
FT /evidence="ECO:0000259|SMART:SM00941"
SQ SEQUENCE 443 AA; 46450 MW; 715296D3347B3803 CRC64;
MRMYDIIEKK RDGGALSDAE IGFFVDGYTS GRIPDYQASA LLMAIYLRGM TPEETRLLTM
HMMNSGDVMD LSSIPGATVD KHSTGGVGDK TSLAVVPMLA AMDPGHTFVA KMTGRGLGHT
GGTVDKLESI PGFDTALTDD AFLSCVREHG ASIIGQTGNL VPADKLIYAL RDVTATVSCI
PLIASSIMSK KLAAGSGCIL LDVKVGSGAF MKTVPEAIEL AQAMVEIGEG MGRRVKALIT
NMDRPLGRNI GNALEVVEVI ETLQGQGPAD LTHEAIMLAS DLLELTGRFD HNEAEARARR
VIEDGSALAK LKEIVVAQGG DVRVIDDPSL LPQASLHETL CAPRAGFVAH IDTERVGVAS
AELGGGRLTL DDEIDHSCGI TLLKNYGDPV EDGEPVAIVH ANDAGKLATG LATLAGAYTY
GPQEPPVEPL LYASVTAAGV AYA
//