GenomeNet

Database: UniProt
Entry: C4IKU5_CLOBU
LinkDB: C4IKU5_CLOBU
Original site: C4IKU5_CLOBU 
ID   C4IKU5_CLOBU            Unreviewed;       475 AA.
AC   C4IKU5;
DT   07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   07-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   SubName: Full=Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EEP54134.1};
DE            EC=1.3.99.22 {ECO:0000313|EMBL:EEP54134.1};
GN   ORFNames=CLP_1328 {ECO:0000313|EMBL:EEP54134.1};
OS   Clostridium butyricum E4 str. BoNT E BL5262.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=632245 {ECO:0000313|EMBL:EEP54134.1, ECO:0000313|Proteomes:UP000003081};
RN   [1] {ECO:0000313|EMBL:EEP54134.1, ECO:0000313|Proteomes:UP000003081}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=E4 str. BoNT E BL5262 {ECO:0000313|Proteomes:UP000003081};
RA   Shrivastava S., Brinkac L.B., Brown J.L., Bruce D.B., Detter C.,
RA   Green L.D., Munk C.A., Rogers Y.C., Tapia R., Sims D.R., Smith L.A.,
RA   Smith T.J., Sutton G., Brettin T.;
RL   Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEP54134.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ACOM01000005; EEP54134.1; -; Genomic_DNA.
DR   RefSeq; WP_003412819.1; NZ_ACOM01000005.1.
DR   AlphaFoldDB; C4IKU5; -.
DR   STRING; 1492.ATN24_12890; -.
DR   GeneID; 66382154; -.
DR   eggNOG; COG0635; Bacteria.
DR   HOGENOM; CLU_029256_1_0_9; -.
DR   Proteomes; UP000003081; Unassembled WGS sequence.
DR   GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR   InterPro; IPR034505; Coproporphyrinogen-III_oxidase.
DR   InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR   InterPro; IPR023995; HemZ.
DR   InterPro; IPR007197; rSAM.
DR   InterPro; IPR023404; rSAM_horseshoe.
DR   NCBIfam; TIGR03994; rSAM_HemZ; 1.
DR   PANTHER; PTHR13932; COPROPORPHYRINIGEN III OXIDASE; 1.
DR   PANTHER; PTHR13932:SF1; OXYGEN-INDEPENDENT COPROPORPHYRINOGEN-III OXIDASE-LIKE PROTEIN HEMZ; 1.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   SFLD; SFLDG01082; B12-binding_domain_containing; 1.
DR   SFLD; SFLDF00310; oxygen-independent_coproporphy; 1.
DR   SFLD; SFLDS00029; Radical_SAM; 1.
DR   SMART; SM00729; Elp3; 1.
DR   SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR   PROSITE; PS51918; RADICAL_SAM; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Oxidoreductase {ECO:0000313|EMBL:EEP54134.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003081}.
FT   DOMAIN          142..385
FT                   /note="Radical SAM core"
FT                   /evidence="ECO:0000259|PROSITE:PS51918"
SQ   SEQUENCE   475 AA;  55272 MW;  CB160C29021DFB3F CRC64;
     MEIKVNLNNL KYRYEVYQLF NVYFPMNEIQ FLEKDEADYI FYIDEQIMKF QYKEYFKEES
     LGEDIKNSLR RFLFLCLRDL TNDVYPWGIL IGIRPSKIAL KLLNEGKSEE EIIDIFKEKY
     LAHADKARLC MDVAKAEERI VNKDNNTIAI YIGMAFCPTK CMYCSFTSNP IGSHKKMVMP
     YVQSLMKEIK EISKYVKEKK LNVETVYFGG GTPTSVSDGE FMMVMDEIYD GFIKDGNVKE
     FTVECGRPDT LNKTKLQTMK DCNVTRISIN PQTMNDKTLK LIGRTHSCED IKEKFHMARQ
     LGFDDINMDI IIGLPGEGHA EVLKTKDEIF KLKPDSITVH GLALKRGSIM YENFVLKKGI
     PITPHEEIVK MYEESKNLAE SLGLSPYYMY RQKNMVGNME NLGYAKEGKE CIYNIQMIEE
     RQTIIALGAA AVSKVVFLEE DRLERFPNLK DLHEYVTRTD EMIERKKELL NSLYK
//
DBGET integrated database retrieval system