ID C4J4F3_MAIZE Unreviewed; 629 AA.
AC C4J4F3; A0A3L6FMZ1;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 81.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:ONM29795.1};
GN ORFNames=ZEAMMB73_Zm00001d039714 {ECO:0000313|EMBL:ONM29795.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACR36053.1};
RN [1] {ECO:0000313|EMBL:ACR36053.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACR36053.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:ONM29795.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM29795.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; BT085700; ACR36053.1; -; mRNA.
DR EMBL; CM007649; ONM29795.1; -; Genomic_DNA.
DR RefSeq; NP_001183205.1; NM_001196276.2.
DR AlphaFoldDB; C4J4F3; -.
DR SMR; C4J4F3; -.
DR STRING; 4577.C4J4F3; -.
DR PaxDb; 4577-GRMZM2G447857_P01; -.
DR GeneID; 100501588; -.
DR KEGG; zma:100501588; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_028150_1_0_1; -.
DR InParanoid; C4J4F3; -.
DR OMA; LMHHFAL; -.
DR OrthoDB; 469585at2759; -.
DR ExpressionAtlas; C4J4F3; baseline and differential.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR044175; At5g66631-like.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47913; OS01G0167750 PROTEIN; 1.
DR PANTHER; PTHR47913:SF1; OS01G0167750 PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 4.
PE 2: Evidence at transcript level;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 138..172
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 173..207
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..487
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 523..557
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 281..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..302
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 629 AA; 68347 MW; 7D116AED73F7D608 CRC64;
MPPPAAPATN RVALYLRRAR LIDSLRVRLR SSSPSSPPAL PPDDPVVALH AIRAAPTASC
ALSLFRAIPS QPPPPLPLYQ ALAARLSSLA ALSDLRAHLA SFPLPAPPLA RLRLLAAAGD
RASALEAFGS LPATPRRPAE AHNVVIELHA RGGDHDAAVE AFRRMVREGA LPNARTYTVV
IAHLASAGFV DQALEVFRIL PSLRVRRTTR QYNVLAEALA SGGRFDQLRW LVREMAAVDG
VMPGPQMRAA IAALREAGHV DGTKDFVEEL SPNARIGYAV DDVEGEGDGE EEDDDDEDEG
EVKDRGNGEK QTLKPWLDPR ELARALDGWD SREVAELEGA GLVWTPRLVC KLLRAFKKAE
TAWEFFCWVA CRPGGFAHDR HTVARMMAIL ARTGHVELVE RLLAKVRADG ILLPLATVRL
VIDFYGLSKK ADAAVRVFQE AESICGPISG PNLALLYSSL LRTMTKCRRG PDAMDLLEEM
MARGVLPDLQ TFSGLMEHLA GAGDLKGVHR LLGLVRQCEL QPDGYMYSVL VRAYCKRERA
ALALRVFDEM RAAGVTPDAP TKALLVKSLW REGKLREAAL VEERCNDVVD GLPDVSPGHV
WTASAADLKK VLDIYSGCLD QPAAQTSTG
//