ID C4QXF7_KOMPG Unreviewed; 470 AA.
AC C4QXF7;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 28-JUN-2023, entry version 72.
DE RecName: Full=Enhancer of mRNA-decapping protein 3 {ECO:0000256|ARBA:ARBA00015797};
GN OrderedLocusNames=PAS_chr1-4_0100 {ECO:0000313|EMBL:CAY67930.1};
OS Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Phaffomycetaceae; Komagataella.
OX NCBI_TaxID=644223 {ECO:0000313|EMBL:CAY67930.1, ECO:0000313|Proteomes:UP000000314};
RN [1] {ECO:0000313|EMBL:CAY67930.1, ECO:0000313|Proteomes:UP000000314}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GS115 / ATCC 20864 {ECO:0000313|Proteomes:UP000000314};
RX PubMed=19465926; DOI=10.1038/nbt.1544;
RA De Schutter K., Lin Y.C., Tiels P., Van Hecke A., Glinka S.,
RA Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.;
RT "Genome sequence of the recombinant protein production host Pichia
RT pastoris.";
RL Nat. Biotechnol. 27:561-566(2009).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, P-body
CC {ECO:0000256|ARBA:ARBA00004201}.
CC -!- SIMILARITY: Belongs to the EDC3 family.
CC {ECO:0000256|ARBA:ARBA00006610}.
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DR EMBL; FN392319; CAY67930.1; -; Genomic_DNA.
DR RefSeq; XP_002490211.1; XM_002490166.1.
DR AlphaFoldDB; C4QXF7; -.
DR SMR; C4QXF7; -.
DR STRING; 644223.C4QXF7; -.
DR EnsemblFungi; CAY67930; CAY67930; PAS_chr1-4_0100.
DR GeneID; 8197317; -.
DR KEGG; ppa:PAS_chr1-4_0100; -.
DR eggNOG; KOG2585; Eukaryota.
DR HOGENOM; CLU_037134_0_0_1; -.
DR InParanoid; C4QXF7; -.
DR OMA; KNRDDEC; -.
DR OrthoDB; 1409462at2759; -.
DR Proteomes; UP000000314; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblFungi.
DR GO; GO:0000932; C:P-body; IEA:UniProtKB-SubCell.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblFungi.
DR GO; GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IEA:EnsemblFungi.
DR GO; GO:0033962; P:P-body assembly; IEA:EnsemblFungi.
DR GO; GO:1900153; P:positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IEA:EnsemblFungi.
DR CDD; cd00600; Sm_like; 1.
DR Gene3D; 3.40.50.10260; YjeF N-terminal domain; 1.
DR InterPro; IPR025762; DFDF.
DR InterPro; IPR019050; FDF_dom.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR004443; YjeF_N_dom.
DR InterPro; IPR036652; YjeF_N_dom_sf.
DR PANTHER; PTHR13612:SF0; ENHANCER OF MRNA-DECAPPING PROTEIN 3; 1.
DR PANTHER; PTHR13612; UNCHARACTERIZED; 1.
DR Pfam; PF09532; FDF; 1.
DR Pfam; PF03853; YjeF_N; 1.
DR SMART; SM01199; FDF; 1.
DR SUPFAM; SSF64153; YjeF N-terminal domain-like; 1.
DR PROSITE; PS51512; DFDF; 1.
DR PROSITE; PS52002; SM; 1.
DR PROSITE; PS51385; YJEF_N; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000000314}.
FT DOMAIN 1..66
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT DOMAIN 93..129
FT /note="DFDF"
FT /evidence="ECO:0000259|PROSITE:PS51512"
FT DOMAIN 211..444
FT /note="YjeF N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51385"
FT REGION 74..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 161..185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 470 AA; 52558 MW; C4903124AD806899 CRC64;
MSQFLGSTVL LVLKNNKRFQ GKIDAVDNKV ASLSSVVDLN TETRQSIPDQ KIPGRDIAKL
EVLSLCDKVL KNNESKKNKN KKKSKAKKDD NDIAWNGDDK LNEEFDFQSN LDKFDKESVF
RELSAKDNID PNLRLAGHNK KVNYDHNEMV VKKEVDTWDN QQSIPTPIAP SRSSTSTFPH
LQRQPSIRQP GFGIQLTDGA NLLPSCSPVQ LLEMERITVD EYKVPIEMLL ENVAINVSSI
VIKSLGGYAR FDQTNHNLPP LILFLVGNNR SGARVLSVGR RLVNIGARCV AILTNTNSDE
LIDSVKRQST IFTKFGGRLV YDINQLTVLL DSLQSPLEFV VDGLQGYDNH LDDLFGVELT
TSNSLIEWVN QQYVNVLSLD IPSGLEPSSA HINSENAFLQ SKFIVSVGLP LNGVLNAYKE
GGVLTPGDCI HYLVDLSVPR AIFKKGSLRK FDRDWFEDKG FIELFIKQTI
//