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Database: UniProt
Entry: C5CLM0_VARPS
LinkDB: C5CLM0_VARPS
Original site: C5CLM0_VARPS 
ID   C5CLM0_VARPS            Unreviewed;       481 AA.
AC   C5CLM0;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 76.
DE   SubName: Full=Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ACS19277.1};
GN   OrderedLocusNames=Vapar_2652 {ECO:0000313|EMBL:ACS19277.1};
OS   Variovorax paradoxus (strain S110).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS19277.1};
RN   [1] {ECO:0000313|EMBL:ACS19277.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=S110 {ECO:0000313|EMBL:ACS19277.1};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA   Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA   Leadbetter J.R., Spain J.C., Han J.I.;
RT   "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR   EMBL; CP001635; ACS19277.1; -; Genomic_DNA.
DR   AlphaFoldDB; C5CLM0; -.
DR   STRING; 543728.Vapar_2652; -.
DR   KEGG; vap:Vapar_2652; -.
DR   eggNOG; COG1502; Bacteria.
DR   HOGENOM; CLU_038053_1_2_4; -.
DR   OMA; TRFILDW; -.
DR   OrthoDB; 9762009at2; -.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008808; F:cardiolipin synthase activity; IEA:InterPro.
DR   GO; GO:0032049; P:cardiolipin biosynthetic process; IEA:InterPro.
DR   CDD; cd09110; PLDc_CLS_1; 1.
DR   CDD; cd09112; PLDc_CLS_2; 1.
DR   Gene3D; 3.30.870.10; Endonuclease Chain A; 2.
DR   InterPro; IPR022924; Cardiolipin_synthase.
DR   InterPro; IPR027379; CLS_N.
DR   InterPro; IPR025202; PLD-like_dom.
DR   InterPro; IPR001736; PLipase_D/transphosphatidylase.
DR   NCBIfam; TIGR04265; bac_cardiolipin; 1.
DR   PANTHER; PTHR21248; CARDIOLIPIN SYNTHASE; 1.
DR   PANTHER; PTHR21248:SF22; PHOSPHOLIPASE D; 1.
DR   Pfam; PF13091; PLDc_2; 2.
DR   Pfam; PF13396; PLDc_N; 1.
DR   SMART; SM00155; PLDc; 2.
DR   SUPFAM; SSF56024; Phospholipase D/nuclease; 2.
DR   PROSITE; PS50035; PLD; 2.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Lipid biosynthesis {ECO:0000256|ARBA:ARBA00022516};
KW   Lipid metabolism {ECO:0000256|ARBA:ARBA00023098};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Phospholipid biosynthesis {ECO:0000256|ARBA:ARBA00023209};
KW   Phospholipid metabolism {ECO:0000256|ARBA:ARBA00023264};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        12..30
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        42..60
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          217..244
FT                   /note="PLD phosphodiesterase"
FT                   /evidence="ECO:0000259|PROSITE:PS50035"
FT   DOMAIN          396..423
FT                   /note="PLD phosphodiesterase"
FT                   /evidence="ECO:0000259|PROSITE:PS50035"
SQ   SEQUENCE   481 AA;  53448 MW;  B962F797E709F495 CRC64;
     MILPELSQEW KTGLSLAWSG YIAVLSVWIV MQKRAPVSTM SWILSLALLP FAGFVIYYFL
     GPQRLRKQRV KRLRSRASAH TQADLARLRD AAQNAPPALQ QMARLGTAAC GLPVSSATGV
     ALLSGGARTF DAIFDAVRAA RDHVHLEYYI FEPDRIGTAL RDLLVERAGQ GVSVRLLLDA
     LGSKRIGRKF MAPLHAAGVQ VALFHDTRIG RRLRPVTNYR THRKIVVCDG RVGFTGGVNI
     TDEEDKRTRP DAYHDVHLRI EGSAVRWLQT TFLEDWTYAT GEDLRDIDHL MGAMLPQVEA
     GDIPVQIVTS GPDNMLEPIH RMHVEAIHSA SERAWLTTPY FVPGEPAMMA LTSAALRGVD
     VRLLVPRRSD SAIVSAAARS YFDELIASGV KVWEYKARML HSKTLVVDDH CAMIGTANFD
     NRSFRLNFEV SAVVYGPELA RPLAAQFETD LHSSGAVRAH RPQSFWRRLG DALARLFSPL
     L
//
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