ID C5CPH4_VARPS Unreviewed; 321 AA.
AC C5CPH4;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACS17695.1};
DE Flags: Precursor;
GN OrderedLocusNames=Vapar_1044 {ECO:0000313|EMBL:ACS17695.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS17695.1};
RN [1] {ECO:0000313|EMBL:ACS17695.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS17695.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; CP001635; ACS17695.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CPH4; -.
DR STRING; 543728.Vapar_1044; -.
DR KEGG; vap:Vapar_1044; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_037628_3_2_4; -.
DR OrthoDB; 9813037at2; -.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR CDD; cd06309; PBP1_galactofuranose_YtfQ-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF3; GALACTOFURANOSE-BINDING PROTEIN YTFQ; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 3: Inferred from homology;
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..321
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002949777"
FT DOMAIN 34..294
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 321 AA; 35007 MW; 7D2678DEA1E7E555 CRC64;
MKLNRRTLNI ALAAASLGGL LPATALAQKK IVLGFSQVGA ESEWRTANTE SIKASAKEAG
IELKFSDAQQ KQENQIKAIR SFIAQKVDVI AFSPVVESGW ETVLREAKAA KIPVVLTDRS
VNTKDDSLYV TFMGSDFVEE GRKAGRWLVE KMKDQKGEVN IVELQGTVGS APAIDRKKGF
EEIIKADPKF KILRSQTGDF TRAKGKEVME AFLKAEGKKI NVLYAHNDDM AIGAIQAIEE
AGLKPAKDIT IISIDAVKGA FEAMIAGKLN VSVECSPLLG PQLMSAVKDI KAGKQLPKRI
VTEETIFPME VAAKEFPNRK Y
//
